Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1401 |
Symbol | |
ID | 3888794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 1609378 |
End bp | 1611066 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637862930 |
Product | NifA subfamily transcriptional regulator |
Protein accession | YP_464612 |
Protein GI | 86157827 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCCG AACTCGACTT TGCGGAAATC ACGGAGCTTT TTCGGCGAGC GCCCCCAGAG GCACCGATCG ACCGTTGCCT TCCGCACCGA TATTTCGGTA GACACCGTTC CATGGTTGGA ATCGGGCTCC CCGTGGTCGG GCAGGACGAC GTGCACCGCC GGATCGTCGA GGAGGCGATC GAGCTGGTGC TCTCCACCGT CGATCTCCAG GCCGTGCTCG AGCGCACGGG GCGGCTGCTG CGCCGCCACT TCGGCGAGAC GCGCGTGGCC ATCAACCGGC TCTCGGCGGA GGACCCGACC CGCGCCGAGG TGGTGCTGGT CTCGGACCCC CGGCAGCCCT CGCCCGAGGT GGGCACCTCG TTCCCGCTGG CCGGCTCCGC CGCGGGCGAG GCGCTCGCGA AGCGGCTGCC GTGCGTGGTG GACCCGCTGC GCCCGCGCGA GCCGCGCTGG CGCGAGGAGC CGCTGCTGGC CGCCTACGGC TACGGCTCGC TCGTGTCGTT CCCGCTCGTG TTCGAGAACG AGCTGCTCGG GACGCTCGAC ATCGCCCACC CGCCGGCGGA GGGGCTGCTC GACTGCTGCT TCGAGGTCGC GCGGCAGGTG GCGCACCTCG TGGCCATCGC GCTCCACAAC AGCCTCATGG TCGAGGAGGT GCAGCGCCTG AACCGGCTGC TCGGCCGCGA GAACGCCCTC CTCAAGGAGG AGATCCGGCA GATCAAGCGC GACTCGCGCT ACGTGGCCGA GAGCGAGGGC ATGCGCGCCG TGGTGGAGCG GGTGCGCCTG GTGGCGCCGT CCACCACCAC CGTGCTGGTG CGCGGCGAGA CCGGCACCGG CAAGGAGGGG CTGGCGCGGA TGGTCCACGA GTTCAGCCCG CGCTTCAACG CGCCGTTCGT GGCCGCGAAC CTCGGCGCCA TCCCCGAGGG GCTCATCGAG AGCGAGCTGT TCGGGCACGA GAAGGGCGCG TTCACCGGCG CCACCCGCCG CCGCGCCGGC CGGTTCGAGC AGGCCGACGG CGGCACGCTG TTCCTCGACG AGGTCGGCGA CGCGCCGCCC AGCGTGCAGG TGCGGCTGCT GCGCGTGCTG CAGGAGCGCG TGGTGGAGCG GGTCGGCGGC ACCGAGCCGG TCAAGGTGGA CGTGCGCGTC ATCGCCGCGA CCAACCGCAA CCTGGAGGAG ATGGTCGCGC GCGGCACGTT CCGCGCCGAC CTCTACTACC GGCTGGCGGT GTTCCCCATC GAGCTGCCGC CGCTCCGCGA GCGGCGCGAG GACGTCCGGC CGCTCGGGAC GTACTTCCTC GCGAAGCAGG CGGCGCTCAT GCACCGACGC CCGCCGCGCG TCGGCGAGGA CGTGTGGCGC GCGCTCGAGG CGTACGGCTG GCCGGGCAAC GTGCGCGAGC TCGAGAACTT CCTCCAGCGC GCGCTGATCC TCTCGCCCGG CCAGGACCTC TCGCTGCCGG CGCTGCCCAC CTCCTCGGCG CTGGCCTCCC CCGCCGCCGC GGCCGCCGCG GAGCCCGCCC CGCCGGGCCG CTTCGACGAC GAGGTCCGCG AGCTCATCGA GCGCGCGCTG GAGCACGCCG GCGGGCGCGT CTACGGCCCG GGCGGCGCCG CCGCGCTGCT CGGCCTCCGC CCGACCACGC TGCAGGGCAA GATGAAGAAG TACGGCGTGG GCACCCCCGG CCGGCCGACC GGCACGTAG
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Protein sequence | MPAELDFAEI TELFRRAPPE APIDRCLPHR YFGRHRSMVG IGLPVVGQDD VHRRIVEEAI ELVLSTVDLQ AVLERTGRLL RRHFGETRVA INRLSAEDPT RAEVVLVSDP RQPSPEVGTS FPLAGSAAGE ALAKRLPCVV DPLRPREPRW REEPLLAAYG YGSLVSFPLV FENELLGTLD IAHPPAEGLL DCCFEVARQV AHLVAIALHN SLMVEEVQRL NRLLGRENAL LKEEIRQIKR DSRYVAESEG MRAVVERVRL VAPSTTTVLV RGETGTGKEG LARMVHEFSP RFNAPFVAAN LGAIPEGLIE SELFGHEKGA FTGATRRRAG RFEQADGGTL FLDEVGDAPP SVQVRLLRVL QERVVERVGG TEPVKVDVRV IAATNRNLEE MVARGTFRAD LYYRLAVFPI ELPPLRERRE DVRPLGTYFL AKQAALMHRR PPRVGEDVWR ALEAYGWPGN VRELENFLQR ALILSPGQDL SLPALPTSSA LASPAAAAAA EPAPPGRFDD EVRELIERAL EHAGGRVYGP GGAAALLGLR PTTLQGKMKK YGVGTPGRPT GT
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