| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1081 |
|---|
| Symbol | |
|---|
| ID | 3887028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 1249058 |
|---|
| End bp | 1251478 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637862604 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_464293 |
|---|
| Protein GI | 86157508 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.506143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGTTTT CCAGGGGCCG GTTTAGATTC CGCGGCTCCG TGACGCGCCA CCTGCTCAGC
GTCCCCGTCC TGCTCGCGGC GCTGCTCCTG GCCGCCGCGC CCGCGCTCGC GCGCGGCGCC
GACGCCGTGC TGTCCGACGT CCGCATCGAG GGCAACCGGC GCGTCGAGGT GGACGCGATC
CGCGCGACCA TCTCCAGCAA GAAGGGCGAG CCGCTCGACC CCAAGAAGGT GGACCAGGAC
CTGCGCGGCA TCATGCGCCT GGGCCTGTTC TCGGACGCCA CCGCGGAGCT GGAGGGGCCG
GAGGCGTCGC CCGCCCTGGT CTACAAGGTG GTGGAGCGGC CCACCGTCCA CGAGGCGAAG
ATCGTCGGGA ACCAGGCGCT CTCGAAGGAC GACCTCAAGG ACACCGTCGA GCTGAAGCCG
TACGCGGTGC TCGACCTGGC CGTCGTCCGC AAGGACGTGA AGAAGATCCA GGAGAAGTAC
GTCGAGAAGG GGTACTACCT CGCCGACGTG ACCTGGAAGG TCGTGGACCT CCCCGACAAC
CAGGCGGACG TGATCTACAC CGTGGACGAG AAGGCCAAGG TCCAGGTGAA GGAGATCCGC
TTCCTCGGGA ACGACCACGT CCCGAAGGAC GACATCACCC CGTTCATGCA GACGCAGGAG
GGGAACCTCC TGTCGTTCCT GAACTCCACC GGCACGTACA AGGAGGAGGC GTTCCAGCAC
GACCTCCAGT CCGTCCAGGC CGTCTACATG GACAAGGGCT ACGTGACGGT GAAGGTGGGG
AAGCCCTCCG TCGCGCTCTC GCCGGACCGC CGGTTCCTCT TCATCACCAT CCCGGTGGAG
GAGGGCGAGA AGTACGACAT CGGCAAGGTC GAGTTCAGCG GCCAGCTCCT CGATCGCGAG
CCGGTGCTGA AGAGGATGGT CCGCACCAAG ACCGGCGACC TGTTCATGCG CTCGAAGGTG
GGCGCCGACA TCTTCGCCAT CGGCGACCTC TACAAGGACA TGGGGTACGC CTACGCGAAC
GTCACCCCGC TGACGAACAC CGACCCGAAG CGCCGCATCG TGGACATCAA CTTCGAGGTG
CAGCCCGGCC CGAAGGTCCA CTTCGAGCGC ATCGAGATCA TCGGCAACGA CAAGACGCGC
GACAAGGTGA TCCGCCGCGA GCTGCGGATC TACGAGGGCG AGCTCTACAG CGGCACCGGG
ATCAAGGCGT CGAAGCAGCG CATCACCGCG CTGGGCTTCT TCGAGACCGT CGAGATCACC
ACCAAGAAGG GCAGCAAGGA CGACACCATC GTCGCCACGG TGGAGGTGAA GGAGAAGGCC
ACCGGCACGT TCCAGGTCGG CGCCGGCTTC TCGTCCTACG AGAACTTCAT CCTCACCGGC
CAGATCTCGC AGAACAACTT CTTCGGCTGG GGCCAGACGC TCTCGCTGCA GGTGCAGTGG
TCGTCGATCC GCCAGCTCGG GCAGATCCAG TTCGTCGAGC CGTACTTCCT CGACACGCGC
TGGACGTTCG CGTTCGACCT GTACGCGACC GAGGGCTACT ACACGACGTT CACCCGGCGG
GCCATCGGCG GCTCGATGAC CTGGGGCTAC GAGCTCTCCG GCCTCTACCC GTGGTGGTCC
TTCGCGCGGA AGCTCGACGA CCTGCGCCTG TTCGCCACCT ACACGAACGA GTACGTGTCG
GTGTCGGCCT CCGACTCCGG CCTGCTCTAC GCGAACCAGT TCAAGTCCGG CACCACCAGC
GCGCTGCGCC TCTCGCTCCA GTGGGACAAG CGCGACAACC GCCTGTTCCC GTCGCGCGGC
TGGTTCGTCT CCACCAGCGC CGAGGCGGCC CCGCCGTTCC TCGCGCCGCA GTGGGCGTTC
GGGCAGAACG TGAACCTGTT CACCCGGTAC GCGGTGGACG CGCGCTGGTA CCGGCCGGTG
TTCCTCGGCC TGATCGCCCG CGCCAAGCTG ACGCTCGGCT ACATCCGCAA CTGGGACGCC
TCGCACCAGG TGCCCATCTC CGAGCTGTAC TACGTGGGCG GCATCAACTC CCTGCGCGGC
TACCGCTATC TCTCCATCGC GCCGGCGGAG GACGTGGGCC GCTCGCGCAA CCCGTCGTCG
GCGCTCTACC CGCTGGCGGT CGGCGGCGAC AAGCAGCTCG TCCTGAACCT CGAGCTCGAG
TTCCCCATCG TCGAGAAGGT GGGCGTGCGC GGGGTGCTGT TCAGCGACAT GGGCAACGCG
TTCGCCCGCG GCAAGTTCTC CGACCCCGAC GTCCCGCTGT CGCTCTACAA GTCGGTCGGG
TTCGGCTTCC GGTGGTTCAG CCCCATCGGC CCGCTCCGGT TCGAGTGGGG CATCCCGCTG
AATCGCCGCA AGGACAAGCT GACCGGCGAA TACGTCGATC AGGCGCTCGA CTTCCAGTTC
ACCATCGGCA ACTTCTTCTG A
|
|---|
| Protein sequence | MRFSRGRFRF RGSVTRHLLS VPVLLAALLL AAAPALARGA DAVLSDVRIE GNRRVEVDAI
RATISSKKGE PLDPKKVDQD LRGIMRLGLF SDATAELEGP EASPALVYKV VERPTVHEAK
IVGNQALSKD DLKDTVELKP YAVLDLAVVR KDVKKIQEKY VEKGYYLADV TWKVVDLPDN
QADVIYTVDE KAKVQVKEIR FLGNDHVPKD DITPFMQTQE GNLLSFLNST GTYKEEAFQH
DLQSVQAVYM DKGYVTVKVG KPSVALSPDR RFLFITIPVE EGEKYDIGKV EFSGQLLDRE
PVLKRMVRTK TGDLFMRSKV GADIFAIGDL YKDMGYAYAN VTPLTNTDPK RRIVDINFEV
QPGPKVHFER IEIIGNDKTR DKVIRRELRI YEGELYSGTG IKASKQRITA LGFFETVEIT
TKKGSKDDTI VATVEVKEKA TGTFQVGAGF SSYENFILTG QISQNNFFGW GQTLSLQVQW
SSIRQLGQIQ FVEPYFLDTR WTFAFDLYAT EGYYTTFTRR AIGGSMTWGY ELSGLYPWWS
FARKLDDLRL FATYTNEYVS VSASDSGLLY ANQFKSGTTS ALRLSLQWDK RDNRLFPSRG
WFVSTSAEAA PPFLAPQWAF GQNVNLFTRY AVDARWYRPV FLGLIARAKL TLGYIRNWDA
SHQVPISELY YVGGINSLRG YRYLSIAPAE DVGRSRNPSS ALYPLAVGGD KQLVLNLELE
FPIVEKVGVR GVLFSDMGNA FARGKFSDPD VPLSLYKSVG FGFRWFSPIG PLRFEWGIPL
NRRKDKLTGE YVDQALDFQF TIGNFF
|
|---|
| |