Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1079 |
Symbol | |
ID | 3887026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 1246351 |
End bp | 1248318 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637862602 |
Product | hypothetical protein |
Protein accession | YP_464291 |
Protein GI | 86157506 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCCGATC CCGTCCCGCA CCGGCCCGGC TCCGAGCCCG GCCATCGCCC GGCGGCGCCC GCGCCCGGCG CGGCCCCCCG CGACGGCGCC GCGCACCCCG TGCCGCCCGT CTTCTCCTTC GCCGCGTTCG CGCTGGTGCT GGCCGGCGTG TTCGGCGCGG CCGCGCTCGC GCCGGTGGCC CACGCCTTCT TCGGCGACCG GCTGGGCCTG CCCACGCCGC TCGCCAGCGG CCTGGCCGCG CTCGCCGGCG CCTCGCTCGG CGGCGCGTTC GGCGCCGCCG CCGCGCGGGT GGGGCGCCGC CTCGCGTTCT ACGAGCTCTC CGCCGCCACG CTGCTGTGGA CCGCGGTGGT CGCGGTGCTG GTGGGCGTGC TGCCCCCCGG CGTCCGCGGC GCGGTGGGCG CGATCCAGGC GCTCGAGGCC CAGGGCACGC TGGTGGTGGT GCTCGGGCTG CTCGGGGCCG GCCTGCTCTC GGCGGTGGCG GTGTTCGCGG GCGCCAGCCT CGCGTACCTG CTGGCGGGCG CGGGCCGGGT GGACGCCTCG CTCTCCTACG AGCTGTTCGT GGCGCGCAGC CACCTGAAGC TCTCGCCGAA GGCGCTCGCG GCGCTGTTCG CGGTGGTGGT GACCGGGCTG CTGCCGGGCC TGCTCCTCGC GCTCGCCTGG TCCCTCGTGC GCGACGCGCG GGAGCGGCGC GCCTACCGCC GCGGCGAGCT GTTCCACCGC CCGCGCATGC CGGCCACGCT GCTCATGACG CTCATCTCGA TCGGCGGCGT CGCCATCGGC GTCTGGGCGC TCACCGTGGT GCTGTCGGTG ATGAGCGGCT TCGAGGCCGA CCTGAAGAAG AAGATCCTGG GCCACACCGC GCACGGCATG GTGCTGAGCT ACGGGCAGGA CGACTTCGGC GACTGGCGCC GCATCCGCGA GACGGTGCTG GGGGTGCGCG GCGTCGAGGC GGCCACGCCG TTCCTCTACA ACGAGGTGAT GCTCTCCACC GGCCAGAACC TGACCGGCGC GATCCTGAAG GGCATCGACG TGAAGACCAT CGGGTCGGTC ACCGACCTGC CCGCGAGCGT GCAGGACGGC CGGCTGGAGT GGCTGGACGC GCCGGCGGAG ATCCCGCTGC CCCGCGACGG CGGCGAGGCC GGGGGCGCGG CGCCGGAGCG GCCGCGCCCG GGCCGCCCGC TGCCGGGCAT CGTGATCGGG CGCGAGCTGG CGCACGCGCT CCGGGTCTTC GTGGGCGACC AGGTCAACCT GGTCTCCCCG TTCGGCGACC TGGGCCCGGG CGGGCCGCAG CCGAAGAGCC GGCCGTTCCG CGTGGCGGCG GTGTTCTACA GCGGCATGTA CGAGTACGAC TCCAAGTTCG CGTACATCTC GCTCGCCGAG GCGCAGCGGT TCTTCGGCGT GGAGACGGTC ACCGGGCTCG AGGTGAAGGT GCGCGACGCG GACGCGGCGC GCTCGGTCAT GGGCCGGGTG GTGTTCGCGC TGGGCGGCTG GCCGTACCGC GCCAAGGACT GGGGCGAGCT GAACCGCAGC CTCTTCTCCG CGCTGCAGAT GGAGAAGGTG GTGATGGCGG TGATCCTCGG CTTCATCGTG CTGGTGGCGA GCTTCATCAT CGTCGCCACG CTCATCATGC AGGTGCTGGA GAAGCGGCGG GAGATCGCGG TGCTGAAGTC CATGGGCGCC GGGGTGCCCA GCGTGATGAA GATCTTCGTG GTGGAGGGCG TGGTGATCGG TGCGGTGGGC ACGGTCTTCG GCCTGCTGCT CGGGCTCGGC ACCTGCCTGC TCATCGACAA GGTCGGCATC CCGCTCGACC CGGGCGTCTA CTACATCTCC AACCTGCCGG TGCTGCTCGA CGGCGCGCAG TTCACGCTGG TGGGCCTGGC CGCGCTCGCG CTCTCCTACC TCGCCACCAT CTACCCCGCC ACCAAGGCGG CCCGCCTCCA CCCGGTGGAC GGGCTGCGGG ACGAGTGA
|
Protein sequence | MSDPVPHRPG SEPGHRPAAP APGAAPRDGA AHPVPPVFSF AAFALVLAGV FGAAALAPVA HAFFGDRLGL PTPLASGLAA LAGASLGGAF GAAAARVGRR LAFYELSAAT LLWTAVVAVL VGVLPPGVRG AVGAIQALEA QGTLVVVLGL LGAGLLSAVA VFAGASLAYL LAGAGRVDAS LSYELFVARS HLKLSPKALA ALFAVVVTGL LPGLLLALAW SLVRDARERR AYRRGELFHR PRMPATLLMT LISIGGVAIG VWALTVVLSV MSGFEADLKK KILGHTAHGM VLSYGQDDFG DWRRIRETVL GVRGVEAATP FLYNEVMLST GQNLTGAILK GIDVKTIGSV TDLPASVQDG RLEWLDAPAE IPLPRDGGEA GGAAPERPRP GRPLPGIVIG RELAHALRVF VGDQVNLVSP FGDLGPGGPQ PKSRPFRVAA VFYSGMYEYD SKFAYISLAE AQRFFGVETV TGLEVKVRDA DAARSVMGRV VFALGGWPYR AKDWGELNRS LFSALQMEKV VMAVILGFIV LVASFIIVAT LIMQVLEKRR EIAVLKSMGA GVPSVMKIFV VEGVVIGAVG TVFGLLLGLG TCLLIDKVGI PLDPGVYYIS NLPVLLDGAQ FTLVGLAALA LSYLATIYPA TKAARLHPVD GLRDE
|
| |