Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_0954 |
Symbol | |
ID | 3886597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 1103212 |
End bp | 1103952 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637862476 |
Product | rhomboid-like protein |
Protein accession | YP_464166 |
Protein GI | 86157381 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.762846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCCGC TCAGCGACGA CGTCCCCACC GAACGCACAC CGGCGGTCAC CCTGCTCTTC ATCGCGGCGA ACGTGCTCGC GTTCCTGTGG CAGGTGGACG TGCTCGCCCT CCCTGACGCG CTCGCCTCCG GCCAGCTGAT GGAGTACGTG GCCGGGCGCC TGGGCGACAC CGCGCTCCGC GGCGGCGTGG TGCCGTTCGA GATCCTCACC TTCTCCGACG TCTACCCCCG CGACCTCGTC CCGCCGCCGC TCACCGTCTT CACCGCGATG TTCCTGCACG GCGGGCTGGT CCACGTCGGC TCCAACATGC TGTTCCTGTG GATCTTCGGG AACAACGTGG AGGACGCGCT GGGGCGCGGG CGCTTCGTGC TCTTCTACCT CGCCTGCGGG GTGGTGGCGG CGGTGGTGCA GGTGGTCGCC TCGGCCGCGA CCGGAGAGCT CGAGGTCCCG ATGGTCGGCG CCAGCGGCGC CATCGCCGGC GTGCTGGCCG CCTACATGGT GCTGTTCCCG CGCGCCCGGG TGACCACGCT CGTCATCATC GTGATCTTCA TCCGCGTCAT CCCGGTCCCG GCCGCCTTCT TCATCGGCCT GTGGTTCCTG CTGCAGGTCC TCTCGATCTT CTTCGGCGGC AACACCGGGG TGGCGCTGTT CGCGCACGTG GGCGGGTTCG TGGCGGGGTG GCTGCTGGTG CGGCTCATGG GGCGGCGGCC GACCTGGCGC GCGCGCCGGG TGAGCTGGTA G
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Protein sequence | MIPLSDDVPT ERTPAVTLLF IAANVLAFLW QVDVLALPDA LASGQLMEYV AGRLGDTALR GGVVPFEILT FSDVYPRDLV PPPLTVFTAM FLHGGLVHVG SNMLFLWIFG NNVEDALGRG RFVLFYLACG VVAAVVQVVA SAATGELEVP MVGASGAIAG VLAAYMVLFP RARVTTLVII VIFIRVIPVP AAFFIGLWFL LQVLSIFFGG NTGVALFAHV GGFVAGWLLV RLMGRRPTWR ARRVSW
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