Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_0742 |
Symbol | |
ID | 3887074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 861108 |
End bp | 861956 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637862263 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_463954 |
Protein GI | 86157169 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.195469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACCGACG CGGCCAGGGA CTTCGAGCCG CACCGGGCGG ACCTGGTGCA GGTGGCCTAC CGGATGCTCG GCTCGGTGGC CGAGGCGGAG GACGTGGTCC AGGACGCGTT CCTGCGCTGG AACGGCGCGG CGCGCGACGG GGTCGAGTCG CCGCGCGCGT TCCTCATCCG CACGGTCACG CGGCTCTGCC TGGACCGCCT GAGCTCCGCG CGCGCGCGGC GGGAGGAGTA CGTCGGGACG TGGCTGCCGG AGCCGCTGGT CGAGCCGGAG GGCACGGGGC TGGCGCACGA TCTCTCGGTG GCGCTGCTCG TCACCTTGCA GCGCCTCTCG CCGCTCGAGC GCGCGGCGTT CCTGCTCCAC GACGTGTTCG ACATGGAGTT CGCGGACGTC GCGGGCGTGC TGGAGCGCTC CGAGGCCGCG GTCCGCCAGC TCGCGTCGCG CGCGCGGGGG CACGTGCGCG ACGCGAGGCC GCGCTTCCGC GCGTCCGACG AGGAGGCGCG GCGGCTCGCC GACGCGTTCC AGGCGGCGCT GACCAGCGGC GACGTCGGCA CGCTCTCGCG GCTGCTCGCG GAGGACGCGG TGTTCTACGC GGACGGCGGT GGCAAGCGCG CGGCGGTGCT CCAGCCGATC GAGGGCCGGG CCGCCATCGT GCAGTTCCTC GAGAAGATCG TGAAGCACCC CGCGTTCCCG GGCGCGAAGG CCTACGAGCG CGCCTGGATC AACGGCATGC CGGGGTTCGT GGTGCACGGC CCCGAGGGCG TCGAGACGCT GGCGATCGAG ATCGGCGACG GGCTGGTGGT GGGGATCTAC GCCGTCCGCA ACCCGGACAA GCTCCGCCAC CTCTCGTAG
|
Protein sequence | MTDAARDFEP HRADLVQVAY RMLGSVAEAE DVVQDAFLRW NGAARDGVES PRAFLIRTVT RLCLDRLSSA RARREEYVGT WLPEPLVEPE GTGLAHDLSV ALLVTLQRLS PLERAAFLLH DVFDMEFADV AGVLERSEAA VRQLASRARG HVRDARPRFR ASDEEARRLA DAFQAALTSG DVGTLSRLLA EDAVFYADGG GKRAAVLQPI EGRAAIVQFL EKIVKHPAFP GAKAYERAWI NGMPGFVVHG PEGVETLAIE IGDGLVVGIY AVRNPDKLRH LS
|
| |