Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_2160 |
Symbol | |
ID | 8492177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013386 |
Strand | + |
Start bp | 9671 |
End bp | 11050 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646360156 |
Product | HNH endonuclease |
Protein accession | YP_003240087 |
Protein GI | 260893993 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTTCG TGTTGGACAG GAAGGGAAGA CCGCTCATGC CCTGCTCTGA GAGGCGGGCG AGGAAGCTTT TGGAACAGGG CCGCGCCGTG GTGGTGCGGC TTGAGCCCTT CGTCATCCGG CTCAAAGACC GGGTGGCGGA GGAAGCTTCT CTCCAGCCGC TCAGGCTCAA GATCGACCCC GGTTACGAGG TCACCGGGAT CTCCGTGGTG CGGGTGGCGG GAGGGAAAGA GGTGGTCGTC TTCTTCGCCG AAGTCCACCA CCGCACGGAC GTACCCGGGA AGCTCCTCTC CAGGAGGCAG GCGAGGAGGA GCCGCCGCAG CCGCAAGACC AGGTACCGCG AGCCCCGCTT TGACAACCGC GGGAGGCCGG AGGGCTGGCT GCCGCCGGGC GCGGTGGCCC GCGTAAACCA GGTGCTCTCG GTGGTCGGGA AGCTCGTCCG GTGGCTACCC GTCACGGAGA TCGTGGTGGA GTCGGCCAAG TTCGACACCC AGAAGCTCCA AAACCCGGAG GTCTCCGGCG TCGAGTACCA GCGGGGAGAA CTCCAGGGCT ACGAGGTCAG GGAATACCTG CTGGAGAAGT ACGGCCGCAA GTGTGCTTAC TGCGGGAAGG AAAACGTGCC GTTGGAGGTG GATCACGTGG TCCCGAAGTC GAGGGGCGGC ACCGACCGGG TGTCCAACCT GACCCTGGCC TGCCGGGAGT GCAACCGGGC CAAGGGGAAC AAGCTCCCCC AGGAGTGGCT GGAAGAGCTG AAGAACTCCG GGCGGGCGGT GGACAGGAAG CGGGCGGAGA ACATACCGAA GGTCCTGGCC CGGCTCAAGG AGCCCTTGAA GGCGGCGGCC TGCATGAACG CGACGCGGTA CGTCCTGGTG GAGAGGCTCA GGGCGCTCGG CCCGCCCGTC CTCACCGCGA CCGCCGCCCA GACCAAGTAC AACCGGGCGA GGTTTAACCT CCCCAAGACC CACTACTTCG ATGCCTGTTG TGTGGGGGAG GTGTCCGGCG AGTTGGAGGT TGCCGCAGGG TATGTACAGG TCTTCCGGGC CGTGGGGCGC GGGACGAGGC AGATGGCGAA CCTCGACCGG CACGGCTTTC CCAGGGGGCA CCGGGCGCGG GGGAAGATCC ACTCCGGCTT TATGACAGGC GACCTGGCGG TGGCGGAAGT CCCTGCCGGG AGGTACGCTG GGAGGTACGT GGGTTACGTG GCCGTGCGGC GGAGCGGGTA TTTCGACCTG AAGGACCTTT CCGGCAGGCG GGTGTGCCAG GGGATAGCCT TTCGCCACTT CAAGCTCGTC CAGCGCTTCG ATGGTTGGCG TTACGAGAAG TTTAAGATTG CGGCGCTTTC CTCCCCACAC CTTAAGGTGG GGGCCTCCAG CGCCGCTTAA
|
Protein sequence | MVFVLDRKGR PLMPCSERRA RKLLEQGRAV VVRLEPFVIR LKDRVAEEAS LQPLRLKIDP GYEVTGISVV RVAGGKEVVV FFAEVHHRTD VPGKLLSRRQ ARRSRRSRKT RYREPRFDNR GRPEGWLPPG AVARVNQVLS VVGKLVRWLP VTEIVVESAK FDTQKLQNPE VSGVEYQRGE LQGYEVREYL LEKYGRKCAY CGKENVPLEV DHVVPKSRGG TDRVSNLTLA CRECNRAKGN KLPQEWLEEL KNSGRAVDRK RAENIPKVLA RLKEPLKAAA CMNATRYVLV ERLRALGPPV LTATAAQTKY NRARFNLPKT HYFDACCVGE VSGELEVAAG YVQVFRAVGR GTRQMANLDR HGFPRGHRAR GKIHSGFMTG DLAVAEVPAG RYAGRYVGYV AVRRSGYFDL KDLSGRRVCQ GIAFRHFKLV QRFDGWRYEK FKIAALSSPH LKVGASSAA
|
| |