Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_2044 |
Symbol | fliF |
ID | 8492052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 2039718 |
End bp | 2041214 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646360033 |
Product | flagellar MS-ring protein |
Protein accession | YP_003239972 |
Protein GI | 260893875 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGTTGG CTACAAAGCC GGTATGGGAG CGCTGGAAGA GCCGTTGGGA GTCCTTTAGC CCGGTCCAGC GCGTGGCCGT GGTGGTAGCC GGGGTGGCAC TCATCGCCTG CTGTGTCTTT CTCCCCCTTT ACCTGGCACA GCTTAACTAC GCCCCTCTCT TTAAAGGGCT GCGCCCGGAA GATGCCGGAG CAGTAGTGCA GAAGCTGGAA GAAATGAAGG TTCCCTACCG GATGACCGAC GGTGGCACTA CCATCCTGGT GCCCAAAGAT CAGGTCTATA AAGTGCGGGC GGAGCTGGCG GCTAAAGGAG CTTTGCCCGG GGCGGGCAAA GGTTTCGAGC TCTTTGACAA GACCAGGCTG GGGATAACCG ACTTCGAAGA GCAGGTGAAC TACCAGCGGG CTTTGCAGGA GGAGTTACGC CGCACCATCT TGCAGTTTGA CGGGGTGGAG GACGCGCGGG TGCACCTGGT CCTGCCGCCG CGAAGCCCCT TCGTCACCGA GCAGCCCAAG CCCTCGGCTT CGGTGGTTCT GAAGCTTAAG CCTCTGGAAA AGCTCAAGCC GGAGCAAGTG GAGGGAATTG TGGCCCTGGT AAGCGGGGCG GTGCAGGGAC TCAAGCCCGA AGATGTCCGA GTGATCGACA CGCGGGGAGA AGTACTTACC CCGCCGACCC AAGGTGGCGA AGTGGGAGCG GTCAGGAACC AGCAGGAGCT CGTGCTGGCT TTCGAGCGGG AGCTCGAGCG GCGGGTGAAA AACTTGCTCG ACCAGATCTT AGGCCCCGGC AAGGCGGCGG TAATGGTTAA CGCCGACTTC GACTTCAGCC GGCGGGAAGT GGTCACCGTG CTGCCCCAGG GCCAGGTGCC GGTAAGCGAG CATACCCTTA CCGAACAGGG AGCGGCTCAG GCGGCCGCAG GAGTGGCCCC CACTTATCCT GCCGGAGGAG CGGGAGGGCA GAACTACTCC AAGCAGGAGA CCACGCGCAA CTACCAGGTG GGGGAGCAGC GGGAGAAGGT CATAGAGGTG CCGGGGAGGC TCAGGCGCCT GACCGCCTCG GTGGTGGTGG ACGGCAACTT GGATCCGGTC ACCATGCAGA AGATCCAGAA CTTGGTGGCC GGGGCTTTGG GCTACAACCC CCAACGGGGG GACCAGATAA CGGTGGATAG CTTCACTTTC GACCGCACCT ACCAGCGCCA GATGGAGGCG GAGATGGCCA AGGCGGAGGC CAAAGCCCGG CAGGAGGCGG CCAAGCGGCG GCTTTACACC CTGATAGGTG CCGGAGCGGG CGGGCTTCTG GGACTGGTGC TGCTCCTTTT GCTCCGGCGG CGCCTGCGGC GGGCGCCTGA GGCGCCAGTG GTGGAGGAGG TGGTCCCGGT GGCTGTCACG GCCGTTCCTC CTCCATCCCC GACCGACCAG AAATTCGCTG AGGTGAAAGA ATTGGCAGAA AAGCGGCCGG AAGAAGTGGC AGAGATCATC AAGGTCTGGC TCCGCTCGGA AGAGTAA
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Protein sequence | MALATKPVWE RWKSRWESFS PVQRVAVVVA GVALIACCVF LPLYLAQLNY APLFKGLRPE DAGAVVQKLE EMKVPYRMTD GGTTILVPKD QVYKVRAELA AKGALPGAGK GFELFDKTRL GITDFEEQVN YQRALQEELR RTILQFDGVE DARVHLVLPP RSPFVTEQPK PSASVVLKLK PLEKLKPEQV EGIVALVSGA VQGLKPEDVR VIDTRGEVLT PPTQGGEVGA VRNQQELVLA FERELERRVK NLLDQILGPG KAAVMVNADF DFSRREVVTV LPQGQVPVSE HTLTEQGAAQ AAAGVAPTYP AGGAGGQNYS KQETTRNYQV GEQREKVIEV PGRLRRLTAS VVVDGNLDPV TMQKIQNLVA GALGYNPQRG DQITVDSFTF DRTYQRQMEA EMAKAEAKAR QEAAKRRLYT LIGAGAGGLL GLVLLLLLRR RLRRAPEAPV VEEVVPVAVT AVPPPSPTDQ KFAEVKELAE KRPEEVAEII KVWLRSEE
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