| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1994 |
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| Symbol | |
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| ID | 8492002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 1997878 |
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| End bp | 1998825 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646359983 |
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| Product | integrase family protein |
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| Protein accession | YP_003239922 |
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| Protein GI | 260893825 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000947418 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAAGC TCTTTCGCCT CTCGGAAAGG CTCCAGTCCA CCTGGCAGGA AGTGCTTGAG
GAGTTCTGCC TCCACCAGCA GGCCCAGGGC AAGGCGGAGA GGACGCTTTA CGACTACCGG
GCGTGGATCG GGCGCTTCTT CCGTCGGCAT CCCGACGCCT GGGGAGACTA CGAGCGCCTG
CGCAGGGCCG TGCTGGAGCA CTTCGCGCAC CTCTCCCACA AGGCCCCGGC CACCTTCAAC
ATGGCCCGCA AGTACCTGAA GCTCTTCTTC GCCTGGTGCG TGCGGGAAGG GTACCTCCCT
GCCAACCCTG TGGACGGCAT CAAGAAGCGC AGGGAGGATG GAACGCCGCG CCCGGTGAGC
CTCGAAGCTG TGCAGAAGCT CCTCACCGCC TGCGACAGGA AGAGCTTCAC AGGGCTGAGA
GACTACGCGC TGATCCTCTT CCAGCTGGAC ACGGGAGTAA GGCCAGGAGA GGCCCTGAAG
CTCCTTCCCG AGCACTTCAA CCTGCGCAGT CTGGAGGTCT ACATCCCCGC GCAGGTCAGC
AAGACGAGGG CGGCCCGCAC TGTGGTCATC AGCCCCCAGA CGGCCAGGGC GGTGCAGAGG
CTCCTCGCGG TGAGGCCTGC CGCCTGGGGG AGCAAGGCCC CGGTCTTCTG CTCGGAGACG
GGCCAGCCGA TGCAGGTGAG CAGCTGGACT CACCGCCTGG CCTTAATCAG CCGCAGGGCG
GGCGTGAAGG TGACGCCCTA CCAGCTCAGG CACACGGCGG CCACGGAACT TCTGCGTGGT
GGCGCTTCCG CCTTCGCAGT GGCGAGGCAG CTGGGCCACC TGCACTTGAG CACCACGAGG
CGGTACATCC AGCTCGTGGA GGAGGACTTG CGCAGGGAGC ACGACAGGGC CAGCCCCGTG
GCCCGCCTGG TGCCTGAGAG GGTGCGGGCA CCGAGGAGGC TCGACTAG
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| Protein sequence | MRKLFRLSER LQSTWQEVLE EFCLHQQAQG KAERTLYDYR AWIGRFFRRH PDAWGDYERL
RRAVLEHFAH LSHKAPATFN MARKYLKLFF AWCVREGYLP ANPVDGIKKR REDGTPRPVS
LEAVQKLLTA CDRKSFTGLR DYALILFQLD TGVRPGEALK LLPEHFNLRS LEVYIPAQVS
KTRAARTVVI SPQTARAVQR LLAVRPAAWG SKAPVFCSET GQPMQVSSWT HRLALISRRA
GVKVTPYQLR HTAATELLRG GASAFAVARQ LGHLHLSTTR RYIQLVEEDL RREHDRASPV
ARLVPERVRA PRRLD
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