Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1982 |
Symbol | |
ID | 8491989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1986548 |
End bp | 1987660 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646359971 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_003239911 |
Protein GI | 260893814 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGAACC TGAAAGAAGA CGAATTTTTC ATGCGGCGGG CCTTGGAGCT CGCCTTGAAG GCCCGGGGGA GGACCAGCCC TAACCCCATG GTGGGGGCGG TGCTGGTCAA AGAGGGGCGC GTGATCGCCG AGGGTTACCA CCGCCGGGCT GGGATGCCTC ATGCCGAGAT AGAAGCCCTG CGGGCGGCCG GGGAAGAGGC GCGGGGGGCC ACGCTTTACG TCAACCTGGA GCCCTGCTGC CATGTAGGAC GCACCGGCCC CTGCACGGAG GCCATAATCG CCGCGGGGAT AAAGCGGGTG GTGGTGGCCA TGGAGGACCC CAACCCTCTG GTGGCGGGGA AGGGGATAAA GATCTTGCGG GAAGCGGGGC TAGAAGTGAC GGTGGGGGTC CTGGAGCAGG AGGCCCGGCG GTTGAACGAG GTTTTTGTAA AGTTCATCAC CACCCGCGAG CCTTTCGTGG TGCTCAAAGT GGCCATGACT CTGGACGGCA AGATAGCCAC CAGCACGGGG GAGGCCCGCT GGATAACAGG CCCGGAAGCC CGGGCTTACG TGCACGAGCT GCGCGACACT TACGACGCCA TACTGGTGGG GAAGGGTACG GTGCTGAAGG ACGACCCTTC CTTGACCGCG CGCCTTCCAG GGGCACGCGA CCCGGTGCGG GTTATCCTTT CAAGCCTCGC CGACCTTCCC CTTTCCGCCC GGGTGCTCAA CCTCAATTCC TCTGCCCCCA CCTGGGTAGC GGTCACGGAG CAGGCTCCTC CTTCTCGGAT TAAGGCCTTG CAGGGTAAAG GAGCAGAAGT ACTGGTGTGC GGTCCCGGCC CGCAGGTGGA CTTGAAGCTT CTGCTCAAGG AGCTGGGCAG GCGGGAGATA ACCGGCGTGC TGGTAGAAGG GGGCGGGACG GTAAACGCCA GTTTCTTGGC GAACCGGCTG GTGGACAAGG TGATCTGGAT GGTGGCGCCC AAGATCTTCG GGGGGACGAA GGCCCCCGGG CCGGTGGGAG GGGAAGGGGT GGAGCACCCC GACCGGGCCC TGCGACTGAA AGACTTAACG GTAAAAAAGC TGGGGGCCGA TTTTTGTTTC GAGGGCTACC CGGAATACCC GGAGGAGAGG TAG
|
Protein sequence | MENLKEDEFF MRRALELALK ARGRTSPNPM VGAVLVKEGR VIAEGYHRRA GMPHAEIEAL RAAGEEARGA TLYVNLEPCC HVGRTGPCTE AIIAAGIKRV VVAMEDPNPL VAGKGIKILR EAGLEVTVGV LEQEARRLNE VFVKFITTRE PFVVLKVAMT LDGKIATSTG EARWITGPEA RAYVHELRDT YDAILVGKGT VLKDDPSLTA RLPGARDPVR VILSSLADLP LSARVLNLNS SAPTWVAVTE QAPPSRIKAL QGKGAEVLVC GPGPQVDLKL LLKELGRREI TGVLVEGGGT VNASFLANRL VDKVIWMVAP KIFGGTKAPG PVGGEGVEHP DRALRLKDLT VKKLGADFCF EGYPEYPEER
|
| |