| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1820 |
|---|
| Symbol | |
|---|
| ID | 8491824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1812702 |
|---|
| End bp | 1814669 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359813 |
|---|
| Product | glycogen debranching enzyme |
|---|
| Protein accession | YP_003239756 |
|---|
| Protein GI | 260893659 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3408] Glycogen debranching enzyme |
|---|
| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGATCTATC ACTTCAGCAA AGAAGCCTGG CGGACGTTCG AGCGCGGTTG TGAGCGGGAG
TGGCTGATCA CCAACGGCCT GGGTGGCTTT GCATCCGGCA CGCTGGTGGG GGCCAACACA
CGCCGCTACC ATGGGCTACT AGTAGCCGCG CTTAATCCCC CGGTCAGGCG CTACCTTTTG
TTGGCCAAGC TGGACGAGCA GCTGATCTGC GGCGGTGTCA CCTACAATCT GGCTACCAAC
TGCACGCGGG ATGGGGTTAC GGAGCGAGGG TACATACACC TGCAGCACGT AAAGATCGAT
CCCTTCCCTA CCTTCACCTA CCGTTGCGGT CTTATCTGGC TGGAAAAAAC CGTGTTCATG
CCCCGCTATC GTAACGCCAC CGTGATCATA TACCGCCTAA GCTCAGGCTC TGGGCCGGCC
GAACTCAGGC TCTGGCCCCT GGTGAACTAC CGGGACTATC ACGGCAACGC CTACTGCGGC
ACCATTTCTT TCCGGCAGGA AAACCTGCCC GGCGGGGTGG TAATCTGGGG GCCAGAGGGT
CTGCCCCCGC TTTTCCTGCA GGTAAGCCGG GGTTCCTTCC ATCCTTCTCC CGACTGGTAC
TACGGCATGC ACTACCCGGC CGAGGCGGAG CGAGGTCTTA ATCCCTACGA GGATCACTAC
CTGCCGGGCT ACTTCACCGT CTTCGTACCT CCGGAGGAAG AGGTTGAAGT GATGGTCACC
GCCTCCTTGG GGGAGGTTCT GGAACCGGCG GCGGCAGGAA AGCTTCTGCG CGAAGCCCGG
GAGCACCTGG AAGAGGTAGT GCGCCGGGCC GGCCATGCTG ACTCTTTGGC CCAGGAGTTG
GTGCGGGCGG CCGACGCCTT CTTGGTCAAG CGCTCCTGCC CTACTGGTAC CTCGGTTATT
GCCGGTTATC CCTGGTTTAC GGACTGGGGG CGTGACGCCC TCATTTCTTT GCCCGGTCTT
ACCCTGGTGA CCAGGCGCTT CACGGAAGCC CGGGAGATTT TGCTTCTTTA CGGTTCGGCG
GTAAAGGAGG GGCTGGTGCC CAACTTCTTC CCCGACGAGG GGGAGCCCTG GTACAATTCG
GTGGATGCTT CCCTCTGGTA TTTTTACGCT GTGCAGCAGT ATTGGCGCTA TACCGGGGAC
AATGACTTCG TGCGGGAAGA AGCCTGGCCC GTCATGCTGG AGATACTGCG CCGCTATGTA
GAAGGCACGC GCTACGGCAT CAAGGCTGAT CCAAAGGACG GACTTCTGCG GGCAGGCGAG
CCAGGGGTGC AGCTTACCTG GATGGACGCT AAAGTGGGGG ACTGGGTGGT CACCCCCCGC
CGGGGCAAGC CGGTGGAGGT AAACGCCCTC TGGTACAATG CTGTGCGTTT CCTGGAGGAA
CTTTCTAGCC GTTGGAACCT GTCTTTCCCT TATTCTGGCC TAGGAGACAA GATAAGGGGA
GGGTTTAAAA AATTCTGGTG CCCGGAAGGA TACCTCTGCG ATGTCATCGA CGACGAGGGG
CGGAAAGATC TGTCCTTCCG TCCTAACCAG ATACTGGCGG CGAGCCTCCC TTATTCTCCC
CTCACCCAAG AGCAGGCCCG GGCGGTAGTA AAGCGGGTAG AGGAAGAGCT TTACACTCCC
TACGGCCTCC GTTCCCTTTC TCCACGCGAT CCTGCCTACC GGGGGAGATA TGTGGGGGAT
GTGCTCCAGC GCGACGCTGC TTATCACCAG GGCACGGTGT GGAGCTGGCT CATAGGCCCC
TTCATCACCG CCTACCGGAA AGTTTTTGCT GGCGAGAAGG CAGCCCGTCG GCAGATACGC
CGCTTTTTCG ATCCCTTCCG GGCCCACCTG GAGGATCACG GAGTAGGGTA CATAAGCGAA
ATCTTTGACG GGGACGACCC CTTCTTACCA CGCGGCTGCT TCGCCCAGGC CTGGGGGGTG
GCCGAGGTGC TGCGCGCCTA CGTAGAGGAC TTTCTGGGGG TGGAGTAA
|
|---|
| Protein sequence | MIYHFSKEAW RTFERGCERE WLITNGLGGF ASGTLVGANT RRYHGLLVAA LNPPVRRYLL
LAKLDEQLIC GGVTYNLATN CTRDGVTERG YIHLQHVKID PFPTFTYRCG LIWLEKTVFM
PRYRNATVII YRLSSGSGPA ELRLWPLVNY RDYHGNAYCG TISFRQENLP GGVVIWGPEG
LPPLFLQVSR GSFHPSPDWY YGMHYPAEAE RGLNPYEDHY LPGYFTVFVP PEEEVEVMVT
ASLGEVLEPA AAGKLLREAR EHLEEVVRRA GHADSLAQEL VRAADAFLVK RSCPTGTSVI
AGYPWFTDWG RDALISLPGL TLVTRRFTEA REILLLYGSA VKEGLVPNFF PDEGEPWYNS
VDASLWYFYA VQQYWRYTGD NDFVREEAWP VMLEILRRYV EGTRYGIKAD PKDGLLRAGE
PGVQLTWMDA KVGDWVVTPR RGKPVEVNAL WYNAVRFLEE LSSRWNLSFP YSGLGDKIRG
GFKKFWCPEG YLCDVIDDEG RKDLSFRPNQ ILAASLPYSP LTQEQARAVV KRVEEELYTP
YGLRSLSPRD PAYRGRYVGD VLQRDAAYHQ GTVWSWLIGP FITAYRKVFA GEKAARRQIR
RFFDPFRAHL EDHGVGYISE IFDGDDPFLP RGCFAQAWGV AEVLRAYVED FLGVE
|
|---|
| |