| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1721 |
|---|
| Symbol | |
|---|
| ID | 8491721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1711980 |
|---|
| End bp | 1712546 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646359716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003239663 |
|---|
| Protein GI | 260893566 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAGC GGGGGATGAC CCTAGTTGAG GTGGTGGTGG CCCTCTGCCT CTTCGCCCTC
CTGGCCACCG GGCTTATGGG GCTTTTCCTC TCCGGCCGGG TGGCTACCGC CGCCAGCTCC
AATAAGCAGG AAGCTTTGTG CCTTGCCCGG GCGCTCATGG AGGCGGTGAA GGCCAGCCCG
GTAGAGTGGG AGGGTGAGGT GCAGGGCGCG GGACCAGACT ATGTCGTGCT GGAAGACAAG
GCCAGCGATC AGGACGACGC CTACAAGGGC TTCTACCTTG CCATCATCGA AGGAGCAGGG
CAGGGGCAGG TGAGGAAGAT CCAGAGTTAC GATGGTTCCT CTCACACCGC TTATGTTGCT
CCTCCGTGGG ACACCGCGCC CGACACCTCC TCCCGCTACC TCATCTTCCG GCTGGAGAGG
GAGCTCCCGG ACACCAGCAA GGTGGCGGTG ACCGCCGAGC CTTCCTCCCA GCAAGGCCTG
GAGAAGGTGA CGGTGACGGT TAGGTACCGC ACTCTCTGGG GCGTGCGGGA AGTGCAACTC
AGCGGCGAGA GGAGGAAGGG AATATGA
|
|---|
| Protein sequence | MNERGMTLVE VVVALCLFAL LATGLMGLFL SGRVATAASS NKQEALCLAR ALMEAVKASP
VEWEGEVQGA GPDYVVLEDK ASDQDDAYKG FYLAIIEGAG QGQVRKIQSY DGSSHTAYVA
PPWDTAPDTS SRYLIFRLER ELPDTSKVAV TAEPSSQQGL EKVTVTVRYR TLWGVREVQL
SGERRKGI
|
|---|
| |