| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1580 |
|---|
| Symbol | |
|---|
| ID | 8491575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1569945 |
|---|
| End bp | 1570781 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359573 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_003239525 |
|---|
| Protein GI | 260893428 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGTGC TGGTAACGGG AGCCGCAGGA CGCCTAGGGC GGGCGATGGT TAAAGAGTTG
GAGGAACGCG GCTTTGACGT GATCGGGCTG GCGCGGCAGC AGCTAGATAT AACTTCGCGC
AAGGCGGTGG CGGAAGTCCT CAGGGAGTAC CGGCCGCGGG TGGTGGTCAA CTGCGCCGCT
TACACCGATG TAGACGGGGC CGAGGAGGAT CCCCGGCGGG CCTTTCTGGT AAACGGTCTA
GCGGTTAAGT ATTTGGCCTC TCTTTGCGCT GCCAGTGAGG CTAAGCTGGT ACACATAAGC
ACCGACTATG TTTTCGACGG AGAAAAAGGG GAGCCTTACC ACGTTTACGA TCCTCCTCGC
CCTATAAACC GCTACGGAGA GAGCAAATAC TGGGGGGAGG CGGCGATAAG GGAGGAAGGC
GGGGATTATC TGATCGTACG GATTAGCTGG CTTTTTGGCA CCGGGCGCAA TTTCGTGAGC
ATGATCTTGC GCTTGGCGGA AACCGAAGGA GAAATAAAAG TGGTAGAGGA CCAGTACGGT
TCTCCCACTT ACACCCCCGA TGCCGCCCGG GCCATCACCG ACCTTATCTT GGCCGGAGCA
AGGGGGACTT TTCACGTGAC CAACGCGGGA ACCGCCTCCT GGTACGAGCT GGCCTGCAGC
GCCGTGCGCC TGGCGGGCAT CAAGGCTAAC GTCATCCCCT GTCGCAGCGA GGATTTTCCC
CGTCCGGCCC GCCGCCCCCG CTACACGGTA CTGGATCCCT TCCCGCTCAA AGAGTACCTG
GGCTACAGCC TGCCTTCCTG GGAGGACGCT CTGGAACGGT ACTTGGCTCG CCGTTAA
|
|---|
| Protein sequence | MRVLVTGAAG RLGRAMVKEL EERGFDVIGL ARQQLDITSR KAVAEVLREY RPRVVVNCAA
YTDVDGAEED PRRAFLVNGL AVKYLASLCA ASEAKLVHIS TDYVFDGEKG EPYHVYDPPR
PINRYGESKY WGEAAIREEG GDYLIVRISW LFGTGRNFVS MILRLAETEG EIKVVEDQYG
SPTYTPDAAR AITDLILAGA RGTFHVTNAG TASWYELACS AVRLAGIKAN VIPCRSEDFP
RPARRPRYTV LDPFPLKEYL GYSLPSWEDA LERYLARR
|
|---|
| |