| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1541 |
|---|
| Symbol | |
|---|
| ID | 8491535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1535098 |
|---|
| End bp | 1535796 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359533 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_003239486 |
|---|
| Protein GI | 260893389 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000897994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG AGAAGACTTA CCGGGTTTCC ATAAAGGAGC TCCCTCCCTC AACCCGCCCG
CGCGAGCGTC TTTGGCGGGA AGGGGCGTCT GCTCTTTCTG AGGTGGAACT CTTGGCCATC
ATCCTGCGTA CCGGCTCGGC CAGAGGCTCG GCCCTGGACC TGGCCCGGTT TCTCCTGGCC
AATTTTGGGG GACTTAAAGG GCTGGCTACG ACGGCGGTAC AGGAATTAAG TTCGGTTCCG
GGCATGGGGG AGGCAAAGGC GGCGCAGGTG GCTGCTGCTC TAGAGTTGGG CCGGAGGTTA
GGGACCTTGG AGGTTTCTTC ACGGCCGGTA ATAAATTCTC CGGCCGCCGC GGCGCAACTG
GTAGTGCCTA CTATGGCCCA TCTAGAGCAA GAGGAGTTTA GGGTGATACT GCTGGATACC
AAGAATCAGT TGCTGGGGAT AGAAACCGTG GCCGTAGGTG GGCTTAACAG CGCTGGGGTC
TTGCCCCGCG AGGTCTTTCG GGCGGCGGTG CGCCGTTCGG CCTGTGCCCT GATTTTGGTG
CACAACCACC CAAGTGGCGA CCCTACGCCC AGCGGGGAAG ACCTGGCTCT TACCCGGCGC
CTGGTGCAGG CGGGGGATCT CTTGGGCATT GAGGTGCTGG ATCACCTCAT CATAGGCGAT
AATTGCTATG TGAGCCTCAA AGAGGCAAAT CTCTGGTGA
|
|---|
| Protein sequence | MKEEKTYRVS IKELPPSTRP RERLWREGAS ALSEVELLAI ILRTGSARGS ALDLARFLLA
NFGGLKGLAT TAVQELSSVP GMGEAKAAQV AAALELGRRL GTLEVSSRPV INSPAAAAQL
VVPTMAHLEQ EEFRVILLDT KNQLLGIETV AVGGLNSAGV LPREVFRAAV RRSACALILV
HNHPSGDPTP SGEDLALTRR LVQAGDLLGI EVLDHLIIGD NCYVSLKEAN LW
|
|---|
| |