| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1456 |
|---|
| Symbol | |
|---|
| ID | 8491449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1462132 |
|---|
| End bp | 1463316 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 646359449 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003239403 |
|---|
| Protein GI | 260893306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000230336 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAT ACCAGCAACT TAAGAGGAGC GGAAACCCCC AGGCAATCGC CCAAACCGTG
GCCTCCCTCC TCACCACCTG TAGCCCTAAA GAGGTAGCCT GCATAATGGG CTGCTCCGTC
CGCTGGATCT ATAAACTGCG CAAACGCCTA AACGAATCCG GCGGAAACTT GTCCGGTTGT
ATCCTCCCTC GCGGCCCCAA AAAAAGAATG CCCAACCGTA CCCCTCAAGA ACTCGAAGCC
CTAGTCGTAA AACTCGCTCA GGAAACTAAC CTGGGCCCTA AACGCCTCGC CTCCCTCCTG
TACCAAAGCC TTAAAATTAA GCTCTCCCCC TACACCATAC GAAATATCCT CAAACGCCAC
CACATCCGCT GCCGCAAACG CCAAAGCAAA ACAGGCTCCC GAAAATACTG GACCGACGTG
CAGGCCTTCG CACCCTTCTC CTTCTGGCAG GTCGATGTAA AACACATAGC CGATAAGTCA
GCTCTGCCGG CCCAAGCCTA CTCCTCTATC CTCAAAAACC GCCTACCCCG TTACCAATTC
ACCGCTATCG ATGTTCGAAC AAGAGTGCGG TTCATAGCCT TCGCCTATTC CCTCTCCTTC
GCCAACGGAA TCACTTTCCT CGTACTCCTG GCAAACTGGC TTAAAACCTT CGGCCTTAAT
CAAACAATCC TTATCCAGAC CGATAATGGC TCGGAGTTCG GTGGCCCTCC TAACTCGAGA
AAGCGTAAAC TCATGTCCCT TATCTTCTCT CGCCTTGACT GCCAGCTGCT TAACATACCC
GCAGGCAGAA AAGAAGCCAA CGGCTATGTA GAAAGATCAC ACCGCACCGA CGATGAAGAG
TTCTACATCC CCTACCTGGC AGGTATCAGA AGCCAGAAGG ATTTCCTTAT CTCTGCCCAG
AGGTGGATCC TTTACTACAA CTACCAGCGT CCACATCTGG GCCGGGAACT GAACGGGAAA
ACTCCTATGG AAATAGCGAC CTCGCTTTCC CACTACCATC CGGCTATAGG GGCTATGCCG
GTGGTAGTCC TGGATCACCT GGCTCCGCAC ATCTTCGATG CCTACAAACT CTCTACTCTC
CCGTGGGATT ACCCACCCAA AAATGAAAGC CTCGCTGTGA ACGAAACCCT GGCTCAATAC
AAAAGAGAAG CGCCGGGTAA AGGTTCTTTA TGTAGAGGCG GATGA
|
|---|
| Protein sequence | MTLYQQLKRS GNPQAIAQTV ASLLTTCSPK EVACIMGCSV RWIYKLRKRL NESGGNLSGC
ILPRGPKKRM PNRTPQELEA LVVKLAQETN LGPKRLASLL YQSLKIKLSP YTIRNILKRH
HIRCRKRQSK TGSRKYWTDV QAFAPFSFWQ VDVKHIADKS ALPAQAYSSI LKNRLPRYQF
TAIDVRTRVR FIAFAYSLSF ANGITFLVLL ANWLKTFGLN QTILIQTDNG SEFGGPPNSR
KRKLMSLIFS RLDCQLLNIP AGRKEANGYV ERSHRTDDEE FYIPYLAGIR SQKDFLISAQ
RWILYYNYQR PHLGRELNGK TPMEIATSLS HYHPAIGAMP VVVLDHLAPH IFDAYKLSTL
PWDYPPKNES LAVNETLAQY KREAPGKGSL CRGG
|
|---|
| |