Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1440 |
Symbol | alaS |
ID | 8491433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1443738 |
End bp | 1446362 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646359436 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_003239390 |
Protein GI | 260893293 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000329754 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCA AAGAGATACG TCAGCGTTTC CTCGACTACT TCCGGCGAAA GGGCCATGTC ATTCTGCCCA GCGCCTCCCT CATTCCGGCT GGTGACCCCA GTCTTTTATG GACGGCGGCC GGAATGGTTC CCTTCAAACC CTATTTTACG GGCGCAGCCA AGCCGGAATT CCGCCGGGTA GCTACTTGCC AGAAGTGTCT ACGTACACAG GACATCGAAT CGGTAGGAAA GACCGCTAGG CATTTGACCT TTTTCGAGAT GCTGGGCAAC TTCTCCTTCG GGGATTACTT CAAGGCCGAA GCTATCGCTA TGGCCTGGGA GTTCGTCACC AAGGAGCTGG GCCTGGATAT CGACCGGCTC TGGTTTTCGG TCTTCGAGGA CGACGAGGAG GCTTTTGAGC TCTGGTGTAA AATGGGTGTG AAGCCCGAGC GGATTGTGCG CTTGGGACGC GACACCAACT TCTGGGAGAT AGGGGTGGGC CCCTGCGGTC CTTGCTCGGA GATTTATTAT GACTTCGGCC CGGCCTTTGC CTGCGGTCCC GATTGCCACG TGGGTTGCGA CTGCGATCGC TACCTGGAAA TCTGGAACCT AGTCTTCATC CAGTACTACC GGGATGAGAA GGGGAATTAC CTCCCCTTAG AAAACAAAGG GATCGATACG GGGATGGGAC TGGAGCGCGT GGCCACCGTG CTCCAAGGAG TTACTTCTCC CTTTGCTACC GATCTTTTCC GTGATATAGT GGCTGCTGCT GAGCGGGAAC TTCGCTCGCC GGTACCTAAC CGCCGGGTTA AGGTTATTGC TGATCACGTT CGGGCGGTCA CCTTTGGTGT GGCTGAAGGA GTTCTTCCTT CTAATGAGGG ACGGGGCTAT GTGATAAGGC GTCTTTTGCG GCGGGCGCTC CTTTATGGGG TGCTGGCTGG TCGGGAGGAG CCTTTCCTGG GCAAGGTGGC CGCGGCGGTG TGTGACAAGA TGGGCGAGGT CTACCCGGAG TTGGTGGCCA ACCGGGAGCA CATACTCCGG GTAATTCGAG CTGAGGAGGA ACGCTTCTTG GGCACCCTTT CTCAGGGCAT GGAGTTGCTT AACCGCAATA TCGAGCAAGT TCTGGCCCGG GGTGGAAAGG TGCTGCCGGG AGAGGAGGCT TTCCGTCTTT ACGATACCTA CGGTTTTCCT TTGGAGCTCA CCGAGGAGAT CTGTGCCGAG AAGGGATTGG CGGTAGACAA GGAAGGTTTT AAGCGAGAGA TGGAGGCCCA GCGCGAGCGG GCGCGCCGGG CGCGGGAAAC GGTCGAGTAT CTGGGGGAGA GGGAGCGCTT TTACCGGGAG CTCCGGGAAG AGAAGGGCAG CGTCGATTTT GTGGGTTATG AGCAGCTGAA TACCAGGTCC CGGGTGGTGG CGCTGGTTAA AGAGGCCAAG CCGCAGTCCT CGGCTTCTGC GGGCGAAGAG GTGGAGGTAG TTCTGGACGT AACTCCCTTT TACGCCGAGA AGGGTGGCCA GGTAAGCGAT AAAGGGGTTC TGCGGTTTCC TTCGGGAGAG GCGCTGGTGG AGTACGTGGA GCAGCCAGTG GAAGGGATGG TTGTACACCG CGTTAAGGTG CAGAAGGGGG AGCTCAAGGT AGGAGACGAG GTGGAGGCGG CGGTGGATGC CGAACGGCGC CGCCGGACCG CCCGCAACCA TACTGCCACC CACCTCTTGC ACCAGGCGCT GAAAGAAATA CTAGGCCCCC ACGTGAAGCA GGCCGGTTCT CTGGTAGCTC CCGACCGCCT GCGCTTCGAC TTCGACCACT ATCAGGCTTT GACCCCGGAG GAAATCAAAC GGGTGGAGAA GAGGGTCAAC GAGATCGTCC TGGCCGCTTT GCCGGTCGTC ACCTTCACCA CTTCGCTGGA GGAAGCTCAG GCCATGGGAG CGGTAGCCCT CTTTGGGGAG AAATACGGCG AGACGGTGAG GGTGGTCAAG ATAGGGGATT ACAGCATCGA GCTCTGTGCT GGTACTCACC TCCGGAACAC AGCGGAGGTA GGAGTGTTCA AGATCGTGGC CGAGGCGAGT GTGGCGGCTA ATACCCGGCG CATTGAGGCG GTGACCGGGG AGAGAGCGCT GGCCTACTTC GAAGAGCTGG AAGACGATTA CCGACGCATT GCTTTTCTCT TAAAGGCTCC TGCCCGGGGG CTTAGCCAGA AGGTAGAAGC TTGGCTTCAG GAGATGAAGG CGCTTGCCCG GGAGAACGAA GCTTTGCGGG ACAAGCTGGC CCTCTATACC ATGCAGGAGC TTCTGGATAA AGTCCAGGAG ATCGATGGGG TCAAGGTGCT GGCGGCGAAG GTGGAGGCGC CAGATACCGC ACGCCTGCGC AGCCTGGCCG ATCTTTTGCG GGAGAAGCTA GGCAACGCGA GCGTGGTGCT TTTAGGGGCG AGCGGTGACG GCAAGGTTAA CCTGGTAGTG GCCGCCACAC CGGGGGCGGT GGCGCGTGGA ATAAACGCGG CGCAGATAGT CAAGGCTATG GCGCAGGTGG TAGAGGGAGG AGGTGGAGGA AGGGCAGAAT TCGGTCAGGC CGGAGGGAAA AATCCTGGGA GGCTAGGCGA AGCACTACGC CTAGGTCAGG AACTTTTGCG GCAGCATCTA GCATCCTCCC GCTAA
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Protein sequence | MEAKEIRQRF LDYFRRKGHV ILPSASLIPA GDPSLLWTAA GMVPFKPYFT GAAKPEFRRV ATCQKCLRTQ DIESVGKTAR HLTFFEMLGN FSFGDYFKAE AIAMAWEFVT KELGLDIDRL WFSVFEDDEE AFELWCKMGV KPERIVRLGR DTNFWEIGVG PCGPCSEIYY DFGPAFACGP DCHVGCDCDR YLEIWNLVFI QYYRDEKGNY LPLENKGIDT GMGLERVATV LQGVTSPFAT DLFRDIVAAA ERELRSPVPN RRVKVIADHV RAVTFGVAEG VLPSNEGRGY VIRRLLRRAL LYGVLAGREE PFLGKVAAAV CDKMGEVYPE LVANREHILR VIRAEEERFL GTLSQGMELL NRNIEQVLAR GGKVLPGEEA FRLYDTYGFP LELTEEICAE KGLAVDKEGF KREMEAQRER ARRARETVEY LGERERFYRE LREEKGSVDF VGYEQLNTRS RVVALVKEAK PQSSASAGEE VEVVLDVTPF YAEKGGQVSD KGVLRFPSGE ALVEYVEQPV EGMVVHRVKV QKGELKVGDE VEAAVDAERR RRTARNHTAT HLLHQALKEI LGPHVKQAGS LVAPDRLRFD FDHYQALTPE EIKRVEKRVN EIVLAALPVV TFTTSLEEAQ AMGAVALFGE KYGETVRVVK IGDYSIELCA GTHLRNTAEV GVFKIVAEAS VAANTRRIEA VTGERALAYF EELEDDYRRI AFLLKAPARG LSQKVEAWLQ EMKALARENE ALRDKLALYT MQELLDKVQE IDGVKVLAAK VEAPDTARLR SLADLLREKL GNASVVLLGA SGDGKVNLVV AATPGAVARG INAAQIVKAM AQVVEGGGGG RAEFGQAGGK NPGRLGEALR LGQELLRQHL ASSR
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