| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1417 |
|---|
| Symbol | |
|---|
| ID | 8491409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1417130 |
|---|
| End bp | 1418467 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359413 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_003239368 |
|---|
| Protein GI | 260893271 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY
[TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000188375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTGT TTTTTGGTCT TACGGAGAAG TTACAAGAAG TGTTCAAGAA GCTAAGGAAT
AAGGGGAAGC TCACGGAGGA AGACGTCAAC GCCGCCCTGC GCGAGATTCG CCTGGCCCTT
CTGGAGGCGG ACGTTAACTA TAAAGTGGTC AAGGACTTCA TCGCCCGCAT AAAGGAGCGG
GCCGTAGGTC AGGAAGTCAT CCAGAGCTTA AGCCCAGCCC ACCAGGTGGT GAAGATCGTA
CGCGACGAGT TGGTGAGCCT CATGGGGGGG CAGAGTGCCC GGCTGAACCT GGCCCCTAAG
CCCCCCACGG TGGTCATGCT GGTGGGGCTG CAAGGCTCGG GCAAAACCAC CACAGCGGCC
AAACTCGCCT TGAGCCTAAA AAAGCAGGGG AGGAGGCCTC TGCTGGTGGC CGCGGACGTC
TACCGGCCGG CGGCCGTAAA GCAGCTCCAG GTGTTGGGGG AGCAGATCCA GGTGCCTGTC
TGGAGCCGGC CCGGTAACCC AGTGGAAATC GCCGCTTCAG CCATGCATGA GGCTAACCAT
AAAGGCTACG ATGTGGTGAT CATCGACACG GCAGGGCGCC TGCACATCAA CGAGGAACTC
ATGCAGGAGC TGGAGGAAAT TAAGGCGCGG GTGAAGCCGC ATGAGGTGCT ACTGGTAGTG
GATGCCATGA CCGGCCAGGA TGCGGTGACG GTGGCGGAGA CCTTCCACCA GCGCCTGGGG
CTGGACGGAG TAGTGCTTAC CAAGCTCGAC GGCGATACCC GCGGCGGCGC TGCCCTCTCC
ATCCGGGCCG TTACCGGCTG CCCCATCAAA TTCGTGGGTG TGGGCGAGAA ACTCGACATG
CTGGAGCCCT TCCATCCCGA CCGCATGGCG GACCGCATCT TGGGCATGGG AGACGTGCTC
ACTTTGATCG AGAAGGCCCA GAGCACGATC GACGCCGAGC AGGCGGCCGC CATGCAGAAG
AGGCTCTTAA GCGACGATTT CAACCTGGAG GACTTCCTGG AGCACCTGCG GCAGTTCCGC
AAAATGGGGC CGCTAGAGCA TATTCTCTCC CTCCTGCCAG GTTTTGGAGG GGTGAAGAAG
CTTAAAGAAG AGCTGCAGTT TGACGAGAAG GAGCTCATTC GGGTGGAGGC CATCATCAAC
TCCATGACCC CGGAGGAGAG GCGCCACCCG GAGATAATCG ACGGGAGCCG CAAGCGGCGC
ATTGCCCGGG GAAGCGGTAC TACGGTGCAG GATGTGAACC GTTTGCTCAA GCAGTTCGAG
CAGACCAAGA AGCTCATCCG CCAGTTTATG GGGAGCAAGC AGCTGAGGAA AAAACGCTTT
CCCAACCTTA AGTTTTAA
|
|---|
| Protein sequence | MGLFFGLTEK LQEVFKKLRN KGKLTEEDVN AALREIRLAL LEADVNYKVV KDFIARIKER
AVGQEVIQSL SPAHQVVKIV RDELVSLMGG QSARLNLAPK PPTVVMLVGL QGSGKTTTAA
KLALSLKKQG RRPLLVAADV YRPAAVKQLQ VLGEQIQVPV WSRPGNPVEI AASAMHEANH
KGYDVVIIDT AGRLHINEEL MQELEEIKAR VKPHEVLLVV DAMTGQDAVT VAETFHQRLG
LDGVVLTKLD GDTRGGAALS IRAVTGCPIK FVGVGEKLDM LEPFHPDRMA DRILGMGDVL
TLIEKAQSTI DAEQAAAMQK RLLSDDFNLE DFLEHLRQFR KMGPLEHILS LLPGFGGVKK
LKEELQFDEK ELIRVEAIIN SMTPEERRHP EIIDGSRKRR IARGSGTTVQ DVNRLLKQFE
QTKKLIRQFM GSKQLRKKRF PNLKF
|
|---|
| |