Gene Adeg_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_1279 
Symbol 
ID8491271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand- 
Start bp1286090 
End bp1286557 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID646359284 
ProductNusB antitermination factor 
Protein accessionYP_003239239 
Protein GI260893142 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0274165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGC GAAGGGCGCG CGAGGCGGCC CTGATGGTTC TTTTTCAGGT TGACGTAGGG 
GGAGCCGTAC CGGAGGAAGC ACTGGAACGC ACCTTGGCAG AGTGGCGCCT GGGTAATGCC 
AGTCGGGAGT TCGCCACCTC TCTGGTTCTG GGTACCCTGG CCTATCGCCC CCAGATAGAC 
CGGGTAATAG AAGAACTTAG CCAGAGGTGG CGGCTGGAGC GCATGAACCG GGTGGACCGG 
AATGTAATGC GCTTGGCCCT TTACGAGCTC TTGTTCCGGC AGGACATCCC GCCGGCGGTG 
GCCATCAACG AAGCGGTGGA GCTGGCCAAG CGCTACGGGG GGGAGGAATC TCCTCGCTTC 
GTCAACGGCA TCTTGGGAAA GGTAGCAGAA AACCTTTCTC TTTATCGGGA GAAGGTCATA 
GACCCCACGG CTGAAGCCGG GGGCTTGTCC TCCAAGCTTC AGCCGTAG
 
Protein sequence
MSRRRAREAA LMVLFQVDVG GAVPEEALER TLAEWRLGNA SREFATSLVL GTLAYRPQID 
RVIEELSQRW RLERMNRVDR NVMRLALYEL LFRQDIPPAV AINEAVELAK RYGGEESPRF 
VNGILGKVAE NLSLYREKVI DPTAEAGGLS SKLQP