| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1097 |
|---|
| Symbol | |
|---|
| ID | 8491085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1111159 |
|---|
| End bp | 1112598 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359114 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
|---|
| Protein accession | YP_003239073 |
|---|
| Protein GI | 260892976 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACTACG AAGCGGTAAT CGGGCTGGAG ATACACGTAG AGCTGAAGAC GGAGAGCAAG
ATCTTCTGCG GCTGCCGGGC AGCCTTCGGA GCCGAGCCCA ACACCCACGT GTGCCCGGTA
TGTCTGGGAC TACCCGGCAC CTTACCGGTG CTTAACCGGC GAGCGGTGGA GTACGCCATA
ATGGCCGCAC TGGCCCTTAA CTGCGAGATA ACCCCTTACT GCAAGTTCGA CCGGAAGAAC
TACTTCTACC CGGATCTTCC CAAAAACTAC CAGATATCTC AGTTCGACCT GCCGCTGGCC
CGTAACGGCT ACCTGGAGAT CGACACCCCT TCCGGCCCCA AGCGGGTGGG GATCGTCCGG
CTGCATCTAG AGGAGGACGC CGGCAAGCTG GTGCATGTGC AGTACGGAGA CAGCTCCTAC
GCACTGGTAG ATTACAACCG GGCAGGAGTG CCGCTTATAG AGATCGTCTC TGCGCCCGAT
CTTCGCTCTC CTGAGGAGGC ACGGGCTTAC GCCGAGAAGC TGAGGCAGAT AATGCTTTAT
CTAGGCATTT CCGACTGTAA GATGGAGGAA GGCTCGCTTA GAGTAGACGC CAACGTCTCG
GTGCGCCCCG CCGGCAGCGA CATCTTGGGG GTAAAGACGG AGATCAAGAA CGTGAACTCT
TTCCGCTCTC TGGCCCGGGC TTTGACCTAC GAGATCGAGC GGCACATAGC CTGCCTTGAG
CGGGGAGAGG AGATAGTGCA GGAGACCCGG GCCTGGGACG AAGAGAGGGG CATAACCTTT
TCCATGCGCA GCAAGGAGGA GGCGCACGAC TACCGCTACT TCCCCGAGCC CGACCTTCCT
CCCCTGGTGA TCGATGCAGA GTGGGTGGAG TCCTTGCGGA AGGCGCTGCC GGAGCTGCCG
GACGCCAAGC GCCGCCGTTT CATCGAAGAG TACGGCCTGC CGGAGAACGC CGCCACCGTC
CTCACGGCCA CTCCGGAAGT AGCCGATTAC TTCGAGGAAA CCTTGAAGTT TTATCCCCAG
CCGCGCCAGG TAGCGAACTG GGTAATGGGA GAGTTGGCCC GCTGTCTTAA CGCCGCCGGT
ATTCCCATAA CCGCCTCGCC GGTAAAGCCC CAGGCTTTAG CCCAGCTCCT CAAGCTTATA
GATGCGGGGA CCATAAGCGG CAAGATAGCC AAGGATGTCT TCGAGGAAAT GTTTGCTACC
GGCAAGGATG CGGAGAGCAT CGTTAAAGAG AAGGGACTTA CGCAGATTAC CGACGAGGAA
GTCATCCGCC AGGTGGTGCG GGAAGTGATC GCGGCCAACC CCAAGGTGGT AGCGGACTAT
AAGGGAGGAA AGGAAAAGGC TCTTTCCTTC CTGGTGGGCC AGGTGATGAA AGCCACGCGG
GGCAGGGCCA ACCCGGGTCT GGTGAATCAG CTGCTCAAAG AGGAGCTCAG CCGGGAGTGA
|
|---|
| Protein sequence | MNYEAVIGLE IHVELKTESK IFCGCRAAFG AEPNTHVCPV CLGLPGTLPV LNRRAVEYAI
MAALALNCEI TPYCKFDRKN YFYPDLPKNY QISQFDLPLA RNGYLEIDTP SGPKRVGIVR
LHLEEDAGKL VHVQYGDSSY ALVDYNRAGV PLIEIVSAPD LRSPEEARAY AEKLRQIMLY
LGISDCKMEE GSLRVDANVS VRPAGSDILG VKTEIKNVNS FRSLARALTY EIERHIACLE
RGEEIVQETR AWDEERGITF SMRSKEEAHD YRYFPEPDLP PLVIDAEWVE SLRKALPELP
DAKRRRFIEE YGLPENAATV LTATPEVADY FEETLKFYPQ PRQVANWVMG ELARCLNAAG
IPITASPVKP QALAQLLKLI DAGTISGKIA KDVFEEMFAT GKDAESIVKE KGLTQITDEE
VIRQVVREVI AANPKVVADY KGGKEKALSF LVGQVMKATR GRANPGLVNQ LLKEELSRE
|
|---|
| |