| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0992 |
|---|
| Symbol | |
|---|
| ID | 8490978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1007616 |
|---|
| End bp | 1008791 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646359016 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003238977 |
|---|
| Protein GI | 260892880 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGC AGATAGCCTA CGTCTGGAAG AGGGAATGGC GCTACATTTT CCGGAATCGC
CGCCTGTTGG GGATACTTCT GGGGGTACCC CTTCTCTACT GCACTCTCTT CGGAATCCTC
TACTACGAGA ATACGGTAAA CCAAATTCCT CTAGGAGTGC TGGACCTGGA CAACTCCTCT
CTAAGCCGGG CCGTAATCCG TGCCTTTCAA GACTCCGATC GCTTCCGGCA CGTTATGAGT
TTTACCGACC AGAAAGAGCT GGAGCAGGCT ATGCACGAAG GCAAGATCAT GGTCGCCCTC
TTTATTCCAC CCAACTTTTC CAAGGAAGTA AAGACGGGCA AAGGCAGCAA AGTAACACTG
ATAACCAACG GCACCAACCT GATTATAGCC AACACATCCC TCACGGCCGC CAGCGAAATC
GTGCAGACTT TATCAGGCGC TACCCTGGTC CGCTATTTAG AAAAAGGCGG GATGTTGCCC
GAAATGGCCT TGCGTCTGGC CCAGCCCATA TCTTTCCAGG TGCGCGTCTG GTACAACCCC
ACCCTCAACT ACTCCAACTT CCTGCTCCTG GGGCTTATAG CCACCATCAC CCAGCAGGTG
GCCCTGCTCT ACGTGGCAAT TGCCATTGTG CGAGAAAAGG AACTTGGTAC CCTGGCCGAG
CTCAAGGCCC ACTGCTCCAG CGTCTTTGCC ATAACCTTGG GCAAGATCCT CCCCTACTTC
GTCTTCAACC TTGTGACCCT GAACCTCTTG TTTGCCGAAG CTGTGTTCCT TTTCCGAATT
CCCTTCCGGG GAAGCTATCC CCTCCTTCTT CTGCTTACCG CCTGCTTCCT GGCCTGTATC
TTAAGCTTCG GTGTCATGGT CTCGGCCCTC TGCCGCAACG AACTGGAGGC CACCCAAATA
GCCATGCTCT TTGCTGTCCC CTCCTTCCTC TTTTCTGGCT TTACCTGGCC TTTCATGGCC
ATGCCCCTCC CAGCCAAGAT ACTGGGCCAC CTCATGCCCC TGACCTATTA CGCCGAAAAC
GTGCGTAAAA TCTTCTTGAT GAACGCCGGA CTCACAGACA TAGCCAAGGA CCTGGGGATT
CTTACTCTGA TGACTCTCTT CTGCTTCGGG ACGGCGCTCG TAGTGGTCAA GCGCAAGTAC
TTCGGAGCTG AAACGGAAGA CACGCTGGAA ATGTGA
|
|---|
| Protein sequence | MFKQIAYVWK REWRYIFRNR RLLGILLGVP LLYCTLFGIL YYENTVNQIP LGVLDLDNSS
LSRAVIRAFQ DSDRFRHVMS FTDQKELEQA MHEGKIMVAL FIPPNFSKEV KTGKGSKVTL
ITNGTNLIIA NTSLTAASEI VQTLSGATLV RYLEKGGMLP EMALRLAQPI SFQVRVWYNP
TLNYSNFLLL GLIATITQQV ALLYVAIAIV REKELGTLAE LKAHCSSVFA ITLGKILPYF
VFNLVTLNLL FAEAVFLFRI PFRGSYPLLL LLTACFLACI LSFGVMVSAL CRNELEATQI
AMLFAVPSFL FSGFTWPFMA MPLPAKILGH LMPLTYYAEN VRKIFLMNAG LTDIAKDLGI
LTLMTLFCFG TALVVVKRKY FGAETEDTLE M
|
|---|
| |