| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0949 |
|---|
| Symbol | |
|---|
| ID | 8490935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 962668 |
|---|
| End bp | 963708 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646358974 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003238935 |
|---|
| Protein GI | 260892838 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000104793 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTGCT CCGTCCGCTG GATCTATAAA CTGCGCAAAC GCCTAAACGA ATCCGGCGGA
AACTTGTCCG GTTGTATCCT CCCTCGCGGC CCCAAAAAAA GAATGCCCAA CCGTACCCCT
CAAGAACTCG AAGCCCTAGT CGTAAAACTC GCTCAGGAAA CTAACCTGGG CCCTAAACGC
CTCGCCTCCC TCCTGTACCA AAGCCTTAAA ATTAAGCTCT CCCCCTACAC CATACGAAAT
ATCCTCAAAC GCCACCACAT CCGCTGCCGC AAACGCCAAA GCAAAACGGG CTCCCGAAAA
TACTGGACCG ACGTGCAGGC CTTCGCACCC TTCTCCTTCT GGCAGGTCGA TGTAAAACAC
ATAGCCGATA AGTCAGCTCT GCCGGCCCAA GCCTACTCCT CTATCCTCAA AAACCGCCTA
CCCCGTTACC AATTCACCGC TATCGATGTT CGAACAAGAG TGCGGTTCAT AGCCTTCGCC
TATTCCCTCT CCTTCGCCAA CGGAATCACT TTCCTCGTAC TCCCGGTAAA CTGGCTTAAA
ACCTTCGGCC TTAATCAAAC AATCCTTATC CAGACCGATA ATGGCTCGGA GTTCGGTGGC
CCTCCTAACT CGAGAAAGCG TAAACTCATG TCCCTTATCT TCTCTCGCCT TGACTGCCAG
CTGCTTAACA TACCCGCAGG CAGAAAAGAA GCCAACGGCT ATGTAGAAAG ATCACACCGC
ACCGACGATG AAGAGTTCTA CATCCCCTAC CTGGCAGGTG TCAGAAGCCA GAAGGATTTC
CTTATCTCTG CCCAGAGGTG GATCCTTTAC TACAACTACC AGCGTCCACA TCTGGGCCGG
GAACTGAACG GGAAAACTCC TATGGAAATA GCGACCTCGC TTTCCCACTA CCATCCGGCT
ATAGGGGCTA TGCCGGTGGT AGTCCTGGAT CACCTGGCTC CGCACATCTT CGATGCCTAC
AAACTCTCTA CTCTCCCGTG GGATTACCCA CCCAAAAATG AAAGCCTCGC TGTGAACGAA
ACCCTGGCTC AATACATGTG A
|
|---|
| Protein sequence | MGCSVRWIYK LRKRLNESGG NLSGCILPRG PKKRMPNRTP QELEALVVKL AQETNLGPKR
LASLLYQSLK IKLSPYTIRN ILKRHHIRCR KRQSKTGSRK YWTDVQAFAP FSFWQVDVKH
IADKSALPAQ AYSSILKNRL PRYQFTAIDV RTRVRFIAFA YSLSFANGIT FLVLPVNWLK
TFGLNQTILI QTDNGSEFGG PPNSRKRKLM SLIFSRLDCQ LLNIPAGRKE ANGYVERSHR
TDDEEFYIPY LAGVRSQKDF LISAQRWILY YNYQRPHLGR ELNGKTPMEI ATSLSHYHPA
IGAMPVVVLD HLAPHIFDAY KLSTLPWDYP PKNESLAVNE TLAQYM
|
|---|
| |