Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0712 |
Symbol | |
ID | 8490697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 729551 |
End bp | 730408 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646358747 |
Product | integrase family protein |
Protein accession | YP_003238709 |
Protein GI | 260892612 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00227312 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTTG AAGAAGTACT CAAAGCCTTC AGGCAGAGCT GCCTTTCCCG GGGCCTCTCT CCCGGCACGG CGGAGGTCTA CCTGGGACAC GTCAGGCGCT TCTTCGGGTG GCTCGGCTGC GCGGACATCA CTGAGGTCAC GCCCTTCGAC GTGGCCTCCT ACAGGCGCCA CCTCCAGGAG AAAGGCAGGA AGCCCGCCAC GGTAAACAAC GCCCTGAACG CCCTGTCGTC CTTCTTCTCC TGGGCGAAAG AAGCGGGCCT GGTTTCTTCC GACCCCACCG AGGGGGTAAG GCAGGTCCCG GAGGACAGGC CCGCTCCCAG GTGGCTCGGG AAGAGGGAGC TGGGCAGGTT CCTGCGTGCG GTGCAGAAGC ACGGGAGCCC GAGGGACCGG GCCCTGGTGG CGCTCCTGCT GCACGCGGGC CTGAGGGTCT CCGAGGCGGT CTCTTTGAGG CTCGAGGACG TGGTCATACG GGAGAGGTCG GGGTTCGTGC GCGTGAGGGG TAAGGGCGGC AAGTACCGGG AAGTGCCCCT GAACGTCACG GTGAGGCGCG TTCTCAAGGA GTACCTGGCA GAGCTCCCTC CTCAAGAGGG CGGGTGGCTC TTCCCGGGGA AGGGCGGGGA GTACCTCACC CGCTTCGCCG TGGAGAAGCT CTTCGCCAGG CTTTCCCGCC TGTCCGGGGT GGAGGTGACT CCCCACAGGC TGAGGCACAC CTTCTGCAAG TGGCTTATTG ACGCCGGTGA GAGCCTGGAT AAAGTAGCGC TTCTGGCAGG GCACTCGAAC CTCAACACCA CCGCGCGGTA CACCAGGCCG GGAGTGGAGG ACCTGGAGAG GGCCGTGGAG AAGCTGAGCT GGGAATGA
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Protein sequence | MQLEEVLKAF RQSCLSRGLS PGTAEVYLGH VRRFFGWLGC ADITEVTPFD VASYRRHLQE KGRKPATVNN ALNALSSFFS WAKEAGLVSS DPTEGVRQVP EDRPAPRWLG KRELGRFLRA VQKHGSPRDR ALVALLLHAG LRVSEAVSLR LEDVVIRERS GFVRVRGKGG KYREVPLNVT VRRVLKEYLA ELPPQEGGWL FPGKGGEYLT RFAVEKLFAR LSRLSGVEVT PHRLRHTFCK WLIDAGESLD KVALLAGHSN LNTTARYTRP GVEDLERAVE KLSWE
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