| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0574 |
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| Symbol | |
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| ID | 8490550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 598874 |
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| End bp | 599788 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646358601 |
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| Product | integrase family protein |
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| Protein accession | YP_003238572 |
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| Protein GI | 260892475 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000663621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAGCC TCATCGACCG CTTCATAATC CACCTGCAGA CGGAAAAAGG CGCCTCTTTG
CGAACTTTAA CCGAGTACCA GAAAGATTTG CTGGAAGGGC TTTCTTTCTT TGCCCGGCTT
TTGGGGGTGG CAGAGGCGGA GCTCTCCCCC CAGTCCATAA CTCCTTCCCT TTTCCGCCGC
TTCTTGGGGT ATTTGCATGA GAGATCCCTT TCCCGCAATA CCATCGCCCG GAAGCTGGCT
GCCTGGCGCA GCTTCTTCCG CTTCCTCTGC CGGGAAGGAA TACTCAACGC CGACCCCTTG
AAGCTAGTAA GCGCCCCTAA GCGGGAGAAG CGCCTCCCCC GCGTGCTTTA TCCCCATGAG
GCCGAGGCCT TGGTGACGGC CCCCAAGGGG ACGGATCCCA AAGCTTGGCG GGACCGGGCC
TTGCTGGAGG TGCTTTACGG CGCCGGGCTG CGGGTAAGCG AGGTGGAGCA TTTAAACCTT
TCGGACGTGG ATCTGGAACG AGGGGAGCTG AGGGTGTGGG GCAAAGGAGG CAAGGAACGG
ATTGCTCTTT TGCACCCGCT GGCGGTGGCG GCTTTAAAAG ATTATCTGGA ACGGGGGCGA
CCTTTGCTCC TGAGCCGGCG CTCTCGAGGA GAGGAAGAGC CAGCTCTCTT TCTCAACCAC
CGGGGGGAGC GCCTCTCTGC CCGGGGGATA AGGCTGATCG TGACCTCCTA CGCGGCCAAG
ACGGGGGTCA AAGGGAAGGT GACCCCCCAC ACCTTCCGCC ACTCTTTCGC CACCCACCTC
CTAGACGGAG GGGCTGATCT CAGGACGGTG CAGGAGCTTC TAGGGCACAA GCGCTTGGCC
ACTACCCAGA TCTACACCCG GCTAAGCCTC GAGCGGATAA AGCATATCTA CGAAAAGACC
CATCCCCGGG CTTAA
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| Protein sequence | MYSLIDRFII HLQTEKGASL RTLTEYQKDL LEGLSFFARL LGVAEAELSP QSITPSLFRR
FLGYLHERSL SRNTIARKLA AWRSFFRFLC REGILNADPL KLVSAPKREK RLPRVLYPHE
AEALVTAPKG TDPKAWRDRA LLEVLYGAGL RVSEVEHLNL SDVDLERGEL RVWGKGGKER
IALLHPLAVA ALKDYLERGR PLLLSRRSRG EEEPALFLNH RGERLSARGI RLIVTSYAAK
TGVKGKVTPH TFRHSFATHL LDGGADLRTV QELLGHKRLA TTQIYTRLSL ERIKHIYEKT
HPRA
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