| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0487 |
|---|
| Symbol | |
|---|
| ID | 8490461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 503101 |
|---|
| End bp | 503352 |
|---|
| Gene Length | 252 bp |
|---|
| Protein Length | 83 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646358514 |
|---|
| Product | transcriptional regulator, AbrB family |
|---|
| Protein accession | YP_003238487 |
|---|
| Protein GI | 260892390 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00969946 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT TTGTGAGCAT GCGTGAGATC GACGAACTGG GAAGGGTAAC ATTGCCGGCG
GAACTCCGGC GGAGCCTGGG CTGGGGCCCC GGTACGCCCC TAGAACTCTT CATCGATGAG
GCTAAGGGGG AAATCGTCCT CCGGCTTTAT GAGCCGGGGT GTCTTTTCTG CGGTCGGGTG
GACAACGTGT TCGAGTTCCG CGGAAAAAAG GTATGCCGCG ACTGCTTCGC CGAGCTGGAA
AAACTGCTAT AG
|
|---|
| Protein sequence | MKVFVSMREI DELGRVTLPA ELRRSLGWGP GTPLELFIDE AKGEIVLRLY EPGCLFCGRV
DNVFEFRGKK VCRDCFAELE KLL
|
|---|
| |