| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0478 |
|---|
| Symbol | |
|---|
| ID | 8490449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 493416 |
|---|
| End bp | 495083 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646358503 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003238479 |
|---|
| Protein GI | 260892382 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.560967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGGTCA AAATATTCCT TCCTTCGGAG GGAAAGTTGG AGGAGAGGCT AGTTAATTTC
CTCGTTCGAG AGTTCGGAGC ATGTTTAAAG GAAGACTGGG AAGAAGCTGA TCTAGTAATC
CTAGGTCGGG ATAGGGCAGA GGAGGGAGGA TGGCAGCTCT GCCGGGAGAT CAAGCAGAAA
ACGCGGGCTC TGGTGGCGGT AGTGGAGAAA AATGCCGTCT CCCCTCCCCC GGCGGTAGAA
GAAGTGGATG ACTTTCTCCC TCCCCAACCG GAGGAGATTA AGCTACGGGT GGCTAATCTT
TTGCGGGTAG CGGCCGTTCG GAAGCAGGCC TATACGGGAG AACCGGGCGA CGTTGCCCCT
TTCTTTTCTT CTTCCGGTCT GGTTGCTCCC CTCCGGGTGG ATCTTCCTAA GGGGCTGGGT
ACGGAGGCTT TAGACAGGCT TCTGAGTCTG GTTAAGGAGT CTCTGGGTAC GATGGTTGTT
CTCCTTCTGC CCCATGATTT CTCGGAGTTT CGCCCAGAAG CCGAGTGGGA ATATGCCGAC
AGCCCTTACT GCCGGGCCTT GCTGGCAACC GCTGGGGACC GAGGCTTTTC TCACTGCCGC
TACGCCCACT GGCTTGCCGG AATAAGGGCG GTAGGAGAGA GACGCACCAT TTACCTCCCT
TGCCCCGGCG GGCTCTTGCT AGGAGCGGTG CCTATTTTTT TGGAGTTCTT CGGGGCCAAG
TACCCCGTAG GGGTGTTGGT GGCGGGACTG GGCGAGGCTC CCTTGGGTGC CACATTAAAA
GAAGTGAGCC AGCGTTTTAA ATTCAGTTAT CTACGGCTCC GTCAGGTGGC CGGCCTAGCA
CGCCGCAAGG CTTCCCGGCA GGACGAGTTA GCTGGTAGGC ATATACTGGA AGCAGTAGGG
GATTACCTCC AGCAGGAGAT CTCGCGAGCC TATCTGCGGG CTTACAGCCT GGTGGGGAGG
CGAGCGGAGT ATGCTTCTTC TCCTCTGGAC ACCGGTGATT CCGCCATGGG GAAGCTGGCC
ACGGCCCTTT TTCACGAGGT CCGCAACCCC TTAACTTCTA TCAAGGGGGT GCTGCAGCTT
CTTTACGAGA AGCGGGACGA TCAGGATCCG GAAAGGCGCT ACCTAGAGGT GGTGCTGGGG
GAGCTTGACC GGACGGTGAG GATAATCCGC AACTTTCTCT ACTTTGCCCG CCCCAAAGAT
TGCCATCCAG TACCGACTGA CCTCGATGCT TTGCTGAGGG ACATTCTTCT TATGGTAGAA
CTCCAAGCTT CAGCAGCGCG TGTCGAGGTA AGCTACGATC CTCACCCTGG CACCCCTGTG
ATTCTGGTCG ATCCAGACCT TATCAAGCAG GCAGTTTTGA ACCTGGCCCA GAACGCGCTG
CAGGCCATGC CTCAAGGTGG TAAACTGTTC TTTCGGCTTT ATCCCCAGGG GAGTGAATGG
GTGATAATCG AGGTGGAAGA CACAGGGACG GGTATTCCGC CGGAGCACTT TCCACGTCTT
GGGGAAGCCT TTTTCACCAC CCGGCGAGGG GGTACAGGAC TGGGCTTAGC CGTAAGCTAC
CAGATAGCGA AAATGCACGG CGGGCGTATA GAGGTGGAGA GCGAAGAAGG AAAGGGAAGT
AAGTTCAGGA TAAAGATTCC CCAGAGGGTG CCCCAAGAAG AAGCCTAA
|
|---|
| Protein sequence | MTVKIFLPSE GKLEERLVNF LVREFGACLK EDWEEADLVI LGRDRAEEGG WQLCREIKQK
TRALVAVVEK NAVSPPPAVE EVDDFLPPQP EEIKLRVANL LRVAAVRKQA YTGEPGDVAP
FFSSSGLVAP LRVDLPKGLG TEALDRLLSL VKESLGTMVV LLLPHDFSEF RPEAEWEYAD
SPYCRALLAT AGDRGFSHCR YAHWLAGIRA VGERRTIYLP CPGGLLLGAV PIFLEFFGAK
YPVGVLVAGL GEAPLGATLK EVSQRFKFSY LRLRQVAGLA RRKASRQDEL AGRHILEAVG
DYLQQEISRA YLRAYSLVGR RAEYASSPLD TGDSAMGKLA TALFHEVRNP LTSIKGVLQL
LYEKRDDQDP ERRYLEVVLG ELDRTVRIIR NFLYFARPKD CHPVPTDLDA LLRDILLMVE
LQASAARVEV SYDPHPGTPV ILVDPDLIKQ AVLNLAQNAL QAMPQGGKLF FRLYPQGSEW
VIIEVEDTGT GIPPEHFPRL GEAFFTTRRG GTGLGLAVSY QIAKMHGGRI EVESEEGKGS
KFRIKIPQRV PQEEA
|
|---|
| |