| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0379 |
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| Symbol | |
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| ID | 8490345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 386215 |
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| End bp | 388347 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646358402 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003238383 |
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| Protein GI | 260892286 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTTT ATGAGGAGTT GCTGGCGCAA GTTAAGGCCT ACAACCCGGG AGTAAATGAG
GCCTTGCTCA GAAAAGCTTT CGATTTTGCC CAAGCCAAGC ACGCGGGGCA GCGGCGTTTT
TCCGGCGAGC CTTTTCTCTC TCATCCGGTG GCGGTGGCCC GTATCTTAGC GGAGCTGGAG
CTGGACACGG AGACCATAGT GGCAGGACTT TTGCACGACG TGGTGGAAGA CACCGGAACT
ACTTTAGAGG AGATCGAGCA CGAGTTCGGG GCGGAGATAG CCGCCCTGGT AGACGGGGTC
ACCAAACTTT CTCGCCTGCA GTTTCGCTCC CAGGAGGAGC AGCAGGCGGA GAACCTCCGG
AAGATGTTCG TGGCCATGGC CAAAGATGTG CGGGTGGTGC TCATCAAGCT GGCCGACCGG
CTACACAACC TCAGGACCCT GCAGTACCTC CCGCCGGAAA AGCAGCGGGC CATAGCCAAG
GAAACCCTGG AGATCTTCGC TCCCCTGGCG CACCGCCTGG GGATTTATCG TCTGAAGTGG
GAGTTAGAAG ATCTGGCCTT TCGCTACCTC GAACCCGAGC GCTACCGTGA ACTGGCGGCC
AAGGTGGCCA AGACACGGGC AGCGCGGGAG GAGTACACCC GCGAGCTCAT TGCCATCCTG
CAGAAGCGCC TAGAAGAGGC GGGGATAAAA GCAGAGCTCA TGGGCCGTCC CAAGAACCTC
TACAGCATCT ACCAGAAGAT GCTGCGCGAC GGCAAGGAGT ACAGTGAGAT TTACGACCGC
ACCGGCATCC GGGCGCTGGT GGAGACGGTG CGGGACTGCT ACGCCGTCCT GGGGGTGGTG
CACACCCTCT GGAAGCCGGT GCCGGGACGC TTTAAAGACT ACATAGCCAT GCCCAAAGAG
AACATGTACC AGTCCCTGCA CACCACCGTG ATCGGGCCCC AGGGGGAGCC AGTGGAAGTG
CAGATTCGGA CCTACGAGAT GCACCGGACG GCCGAGTACG GCATCGCTGC CCACTGGCGC
TACAAAGAAG GACAGACGCG CGACAAGCAG TTGGAGGCCA AATTTGCCTG GCTCCGCGAG
CTCTTAGAGT GGGTCCAGGA GATGCGGGAC GCGCGGGAGT TCATGGAACG GCTGAAGATC
GACGTATTCT CCGACGTAGT CTTTGTCTTC ACCCCCAAGG GAGACGTGGT GGAGCTCCCT
GCGGGAGCCG TTCCCCTGGA CTTCGCCTAC CGTATCCACA CCGAGGTAGG GCACCGCTAC
AAAGGGGCCA AGGTGAACGG GCGGCTGGTG CCCCTGGACT ACCAGCTCAA GACGGGAGAC
ATAGTGGAGA TCATCACCGG CCCCAAGCCC AACCCCAGCC GCGACTGGCT CAACGTGGTG
CGTACTTCCC AGGCCCGCTC CCGCATCCGG CAGTGGTTCA AGCGGGAGTT CCGGGAGGAA
GCTAAGGCCT TAGGTAGAGA GCTTTTAGAG AAGGAGGCCC GCCGGCTGGG CCTGCCCTTA
GAGGAACTGA AGGAAGAAAA GCTTTTGGAG CAGGCCCGCC GCTTCAATCT TCAGACCGTA
GAGGACCTCT ACGTGGCCCT GGCCCAGGGC GCGGTCACTC CTTCCTCCAT CCTCCGTGCG
GACCTCAAGG AGAAAGAGAA GGCCACTCCC CCGGCCGAAA ACCGGGCCAA GAGGCGCTCC
AACGGACACT GCCCCGGAGT GCGGGTGGTG GGAGCGGACA ACGTCCTGGT GCGTCTGGCT
CACTGCTGTC ACCCCATACC CGGCGATCCC ATCATCGGCT ACATCACCCG GGGGAGGGGG
ATTTCGGTCC ACCACCGCGA CTGCCGCAAC GTGGCGGTGT GGCAGGAGAG AGAGAAGGAG
CGGCTGGTGG AGGTGTTCTG GGAGGAAGGG GTGGAGACGC CTTTTGATGT GCGCCTGGAG
ATTTCGGCGG TAGATCGGGC GGGGCTTTTG GGAGACGTCA TGGAGGTTCT GGCCGACATG
AAGATCAGCG CCTCCTGGGT AGAAGCACGG GGGAACAGAC GCATGGCCAC CATCGAGTTT
ACCGCCCGCG TACGCAACAA GGAGCAGCTC GACTATCTCA TGCGGAAGAT CTCCCGGGTG
AAAGACGTAT TTGAGGTGCG GCGGGTGGTG TGA
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| Protein sequence | MELYEELLAQ VKAYNPGVNE ALLRKAFDFA QAKHAGQRRF SGEPFLSHPV AVARILAELE
LDTETIVAGL LHDVVEDTGT TLEEIEHEFG AEIAALVDGV TKLSRLQFRS QEEQQAENLR
KMFVAMAKDV RVVLIKLADR LHNLRTLQYL PPEKQRAIAK ETLEIFAPLA HRLGIYRLKW
ELEDLAFRYL EPERYRELAA KVAKTRAARE EYTRELIAIL QKRLEEAGIK AELMGRPKNL
YSIYQKMLRD GKEYSEIYDR TGIRALVETV RDCYAVLGVV HTLWKPVPGR FKDYIAMPKE
NMYQSLHTTV IGPQGEPVEV QIRTYEMHRT AEYGIAAHWR YKEGQTRDKQ LEAKFAWLRE
LLEWVQEMRD AREFMERLKI DVFSDVVFVF TPKGDVVELP AGAVPLDFAY RIHTEVGHRY
KGAKVNGRLV PLDYQLKTGD IVEIITGPKP NPSRDWLNVV RTSQARSRIR QWFKREFREE
AKALGRELLE KEARRLGLPL EELKEEKLLE QARRFNLQTV EDLYVALAQG AVTPSSILRA
DLKEKEKATP PAENRAKRRS NGHCPGVRVV GADNVLVRLA HCCHPIPGDP IIGYITRGRG
ISVHHRDCRN VAVWQEREKE RLVEVFWEEG VETPFDVRLE ISAVDRAGLL GDVMEVLADM
KISASWVEAR GNRRMATIEF TARVRNKEQL DYLMRKISRV KDVFEVRRVV
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