| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0342 |
|---|
| Symbol | |
|---|
| ID | 8490307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 342758 |
|---|
| End bp | 345745 |
|---|
| Gene Length | 2988 bp |
|---|
| Protein Length | 995 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646358371 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003238353 |
|---|
| Protein GI | 260892256 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.573197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGG AAGGGGCTGT GCTGGTGGTG GGAGGTGGGG TGGCGGGGAT CCAGGCCTCC
CTGGAGCTGG CACGGCTGGG TTTCTACGTC TATCTGGCGG AGAGAGGCCC CAGCATTGGT
GGGGGAATGG CCTACCTCGA TAAGACCTTT CCCACGGAGG ATTGCGCCCT CTGCATCCTT
TCCCCCTTCC TGGTGGAGTG TGCCCGCCAC CGCAACATAG AGATCCTGAC TGGGGCGGAG
GTCAAGGGCC TTTCCGGCGA ACCGGGAAAC TTCCGGGTGA AGCTAGAGCT TCATCCCCGG
GGAGTGAAAG TGGAGGAGTG CCGGGCCTGC GGTGTTTGCT TCAAAGTCTG CCCGGTGGAG
GTCCCCGACG AGTTCAACCA AGGCTTGTCA AGCCGCAAGG CCATATACCA GCCTTACCCC
CAGGCCTTTC CCCGCGCGGC GGTTATCGAC TGGGGGAGTT GCACCCGCTG CGGCCGCTGC
CGGGACACCT GCCCGACCAA GGCCATAGAC CTGGAGATGG AGCCGGAGGA GAAAGAACTT
TCCGTGGGGG CGATACTCTT AACGCCCGGC TTTTCCCTTT TTTCTCCTGC CAGCCTTTCC
CCGGCCTACG GCTGGGGCCT GCTTCCCCAG GTGATCACCA ACCTGGAAAT GGAGCGCATC
TTAAGCGCTT CCGGCCCCTT CGGCGGTGCC GTCATCCGGC CTTTTGATGG GGGCTTTCCC
CGGCGGATAG CCTGGCTGCA GTGCGTGGGC TCGCGCGACC GGCGCCTTAA CCGCCCTTTC
TGCTCTTCCG TCTGCTGCAT GATCGCCCTC AAGCAGGCCC ACCTGGTGCG GGAGCGCACC
CGGGGAGAGG TGGAGACGGT GATCTTTGGT ATGGACCTGC GCGCTTTCGG CAAGCGCTTT
GAGGAGTACG CCCTGCGGGC CCAGGAGGAC GGGGTGCGCT TTATCCCCTG CCGGATACAT
AGTCTTGTTC CCGCTGGGGA AGGAGTGCGC CTGCGCTGGG TGGAAGAGGG CGAAGCAAGG
GAGGAAGTTT TCGACCTGGT GGTTCTCTCC TTGGGCTTGG CTCCCCCGGC GGCCAGCGAC
AAGCTTTTGG ATAACCTGGG GATACCTGCA GGACATTTTG GCTTCTGCCC GCAAGAAATC
GCAGGTATGG GTACGGGCAG GCCGGGCATT TTCGTGGCCG GCACTTTTGC CGGGCCCAAA
GATATACCGG AAGCGGTGGC GGAGGCCACG GCCGCTGTGG GGGAGATAAG CTCCTGGCTT
AAAGAGACTC GGGGAACCCG GGTGACTGCC CCTTCTTATC CCCCTCCGCT GGAGCTGGCC
GGTGAGCCCC GGATCGGGGT GGTAGTCTGC GACTGCGGCA CCAACATCCG CGGGGTGGTA
AAGGTGCCCG AGGTAGTGGC CCTAGCCCGG CAACTCCCCG GCGTGGTGTG GGCCCGGGAG
TTCCTCTACG CCTGCTCCCA GGATAGCCAG CAGGTAATCA AGGAGGCGGT CCTTCGGCAC
CGGCTCAATC GGCTGGTGGT GGCTGCCTGC TCCCCGCGTA CCCACCGTCC CCTCTTCCGC
GAGACCTTGC AGGAAGTGGG GCTTAACCCC TACCTCTTAG AGATGGTCAA CATAAGGGAC
CACTGCTCCT GGGTGCATCA CGACCCGGAG GAAGCCACTG CCAAGGCCCA AGCGCTCTGC
GCCATGGGGG TGGCCAAAGC GGCCAGGCTC AAACCCCTTT CCCCAGCCCA GGTTCCCGTC
GTTCCTCGGG CGTTGGTGGT GGGGGGCGGA GTAGCGGGCC TGACCGCGGC TTGCTCCTTA
GCTGATCAGG GGGTAGAAGT AGTTCTGGTG GAAAAGACCG GGAGAATCGG CGGGAGGGCG
CGGGAGCTTT ATTACGGTCT TGATGGAGAA GATCCCCGCC GGCTAAGTCA CAAGCTTACC
GAAAAGGTGC AATCTCACCC GCGGATAAGG GTTTACACCG GAACTGTTCC CGTGAGTTGC
GAAGGGTTTA TAGGCAACTT CAAGGTGAAA CTAAGTAACG GCGAGGAAGT GCGTTGCGGC
GCCGTCATCT TGGCCACTGG TGCCTTGCCC CATAAACCAC GGAGCTTCCT TTACGGTACT
GATCCCCGGG TAACTACTTT GTGGGAGTTT GAAAAAGGCT GGGCTAAAGA GAGGGTGCGT
TTTACTGAAG CACAAGAAAT TCTTTTCCTG CAGTGCGTCG AATCCCGCAC TCCGGAGCGT
CCCTATTGCA GCCGGGTCTG CTGTAGCAAG ACGGCTTTAT TAGCCCGCCA GGTGAAGGAG
CAGAAGCCTT CTGCCCGGGT ATATGTGCTT TACCGGGACG TGCGTACCTA CGGCTTCCGG
GAAAAGCTTT ACGATGCGGC CCGTGCGGCT GGGGTAATTT ACCTCCGCTA CACACCTGAC
CGTCCTCCTC AGGTGGAAGA GGAAGAAGGG AAGCTCAAGG TCACTCTCTT TGACCCCCTT
CTCGGAGAGG AGCTGGTCTT CCGTCCCGAC CTGCTGGTAC TGGCTACCCC CATGGTGGCT
CCCCCGGGAA GGAAGGAAAT GGCCCAGATC TTCAAGGTGC CGGTGGACGA GTACGGCTTC
TTCTGGGAGG CCCACCCGAA GCTCAGGCCC GTGGACTTTG CGGCGGAAGG GATCTTTCTC
TGCGGCACGG CCCACAGCCC CCGGAGCCTG AAGGAATGCC TTATCCAGGC CAAAGCGGCG
GCGGCCAGGG TGGCTTCCAT CCTCCTCCAG GAGGAGCTCA CGGGCAAGGG GGAGGTGGCC
CGGGTAGACC CTGCGAAGTG CGTGGCATGT CTTACCTGCG TGCGCGTCTG TCCCTACGGT
GCCCCGCGCT ACACCCCGGA AAAAGGGGTG GTGGCGATCG AACCCCTGGC CTGCCAGGGC
TGCGGCACCT GCGTGGGGGA GTGTCCCAAC GCGGCCATTG AGCTGGAAGG CTACCGGCGG
GAGCAGATGG CGGCGGCCGT CGCCGGGCTT TTGGGGGTGA GAGGTTGA
|
|---|
| Protein sequence | MRKEGAVLVV GGGVAGIQAS LELARLGFYV YLAERGPSIG GGMAYLDKTF PTEDCALCIL
SPFLVECARH RNIEILTGAE VKGLSGEPGN FRVKLELHPR GVKVEECRAC GVCFKVCPVE
VPDEFNQGLS SRKAIYQPYP QAFPRAAVID WGSCTRCGRC RDTCPTKAID LEMEPEEKEL
SVGAILLTPG FSLFSPASLS PAYGWGLLPQ VITNLEMERI LSASGPFGGA VIRPFDGGFP
RRIAWLQCVG SRDRRLNRPF CSSVCCMIAL KQAHLVRERT RGEVETVIFG MDLRAFGKRF
EEYALRAQED GVRFIPCRIH SLVPAGEGVR LRWVEEGEAR EEVFDLVVLS LGLAPPAASD
KLLDNLGIPA GHFGFCPQEI AGMGTGRPGI FVAGTFAGPK DIPEAVAEAT AAVGEISSWL
KETRGTRVTA PSYPPPLELA GEPRIGVVVC DCGTNIRGVV KVPEVVALAR QLPGVVWARE
FLYACSQDSQ QVIKEAVLRH RLNRLVVAAC SPRTHRPLFR ETLQEVGLNP YLLEMVNIRD
HCSWVHHDPE EATAKAQALC AMGVAKAARL KPLSPAQVPV VPRALVVGGG VAGLTAACSL
ADQGVEVVLV EKTGRIGGRA RELYYGLDGE DPRRLSHKLT EKVQSHPRIR VYTGTVPVSC
EGFIGNFKVK LSNGEEVRCG AVILATGALP HKPRSFLYGT DPRVTTLWEF EKGWAKERVR
FTEAQEILFL QCVESRTPER PYCSRVCCSK TALLARQVKE QKPSARVYVL YRDVRTYGFR
EKLYDAARAA GVIYLRYTPD RPPQVEEEEG KLKVTLFDPL LGEELVFRPD LLVLATPMVA
PPGRKEMAQI FKVPVDEYGF FWEAHPKLRP VDFAAEGIFL CGTAHSPRSL KECLIQAKAA
AARVASILLQ EELTGKGEVA RVDPAKCVAC LTCVRVCPYG APRYTPEKGV VAIEPLACQG
CGTCVGECPN AAIELEGYRR EQMAAAVAGL LGVRG
|
|---|
| |