Gene Adeg_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0122 
Symbol 
ID8490083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand+ 
Start bp113410 
End bp114060 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content59% 
IMG OID646358160 
ProductDNA binding domain protein, excisionase family 
Protein accessionYP_003238146 
Protein GI260892049 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGT ACCGCAAGAA GCGCATGTAC CGGATTGCCG AAGCGGCAGT CCTGCTCGGC 
GTTCACAAAG ACACCCTGCG CCGCTGGGAA AGGGAAGGAA AGATCAAAGC CGTCTGGCTC 
GGGCGAGAGC GCCGCTTCCC CGAAGAAGAG ATCCGCCGCC TCTTAGGAGA AGCCAACCCC 
GACACGGTAG TGCTTTACGC CCGGGTATCG GGCCACGACC AGAAAGCGGA TCTCCAGCGG 
CAGGTAGAGG TATTGAGAGA AGCGTACGGC CCCAAATTCT CTAACGTGGT GGTCCTGACC 
GACGTCGGTT CCGGCCTCTC GACTTCCCGC AGGGGTTTGA GGAAGGCCAT GGAACTGGCC 
CGGGAGAGAA AGATACGTGC CGTCGCCGTC ACCTGTCCCG ACAGGCTGAC GCGCTTCGGC 
TTCGAGTACC TGGAAGAGTA CTTCTCGAGC TTCGGCGTCG AAGTCCTCGT GCTCAACCGG 
GAAGAAGACA AAAGCCCGCA GCAGGAACTG GTAGAAGACC TTCTCACCAT AGTCACCTCT 
TTTGCAGGCA AGCTCTACGG GCACAGGTCG CACAAGGTAA AAAAGCTTAA GAATGAGGTG 
AAGGAGGCAC TCTCCCGCCT TGATACTGAC GACCAGCTTG AGACTCCCTG A
 
Protein sequence
MSKYRKKRMY RIAEAAVLLG VHKDTLRRWE REGKIKAVWL GRERRFPEEE IRRLLGEANP 
DTVVLYARVS GHDQKADLQR QVEVLREAYG PKFSNVVVLT DVGSGLSTSR RGLRKAMELA 
RERKIRAVAV TCPDRLTRFG FEYLEEYFSS FGVEVLVLNR EEDKSPQQEL VEDLLTIVTS 
FAGKLYGHRS HKVKKLKNEV KEALSRLDTD DQLETP