Gene Adeg_0070 details

Gene Information

• Locus tag: Adeg_0070
• ID: 8490030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ammonifex degensii KC4
• Kingdom: Bacteria
• Replicon accession: NC_013385
• Strand: +
• Start bp: 63055
• End bp: 63504
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 646358109
• Product: sugar-phosphate isomerase, RpiB/LacA/LacB family
• Protein accession: YP_003238096
• Protein GI: 260891999
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.212167
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAATAG CCATAGGTTC GGATCACGGC GGCTTTCAGC TCAAAAAAAC CATCTGCCGC 
TTCCTCGAGG AGGAGGGTAT AGCCTACCAG GATTTCGGCA CCTACTCCTC CGAGTCTTGC 
GACTATCCGG ACATAGCCTT CGCTGTGGCG GAGGCGGTGG CGCGCGGGGA GTTCGATCGG 
GGGATTTTGA TTTGCGGCAC CGGCATAGGG ATGGCTATTG CGGCCAATAA GGTGCCGGGG 
ATAAGGGCAG CTTTGTGTCA CGATACCTAT TCAGCCCGCA TGTCCCGGGA GCATAACGAT 
GCCAACGTGT TAACCTTAGG AGAGCGGGTA GTAGGACCAG GCCTGGCCGT GGAAATAGTT 
AAGGCCTGGC TCTCTTCTTC CTTTGCAGGA GAGCGGCACA GCCGCCGCGT GGAGAAAATC 
AAGGCGCGCG AAAGAGGAGG TTCGAAGTAG 

 

Protein sequence

MKIAIGSDHG GFQLKKTICR FLEEEGIAYQ DFGTYSSESC DYPDIAFAVA EAVARGEFDR 
GILICGTGIG MAIAANKVPG IRAALCHDTY SARMSREHND ANVLTLGERV VGPGLAVEIV 
KAWLSSSFAG ERHSRRVEKI KARERGGSK