Gene Acry_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3610 
Symbol 
ID5159396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009471 
Strand
Start bp28668 
End bp29333 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID640538912 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001220345 
Protein GI148244109 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones120 
Plasmid unclonability p-value0.302219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTATG ATTATATCGT TCATCTCGCA AATTATTCGG ACGGTGTGCT TTATGTGCTC 
GCTGGTCTTT TCGTCATCGC AGTAGCGGTG ATCATCGACC GGATGTGGTA TCTTCGCCGG
GCGATCTTGC GGGGCGGTTC GATCGTCAGG CGGATGGCGG CCATGGGCCG GGTGAACGAG
CAGGATCTTG CAGCGTTGCG CGATTTTGCC GGCCGCATGC CCGAAGGGCT GCTGCTCGAC
ACCGCCCTGA ATCATATGAA TGACGCCGAC CACGCCGGCA TGAACAGCCG CATGGATGAG
GCGATCATGC TGGTTGCGCC CCGGCTCGAC CGCCGGATGT GGGTGCTGGA TACGATCGTC
ACCCTCGCCC CGCTGCTCGG CCTGTTCGGC ACGATCATCG GGATGTTCCA CGCCTTCTCG
ATCCTCGCCA CGCCCGGCCA CGCGCCGGCA GAGGTGACCG GCGGCGTCGC CGATGCACTG
GTTGCAACGG CGTGCGGCAT CTTTATCGCC ATGATCGGCC TCGCGACCTT CAACATGCTG
CAGAACCAGG TCCGGCTGAT CATTCACCAG CTTGAGACGA TCCGCACCAT GGTGCTGAAT
CGTACCGACG GCGCGCCAGT CGTCGTTCCG AAGCCGATGG ATAATACCAA ATCCTGTGGG
GAGTGA
 
Protein sequence
MSYDYIVHLA NYSDGVLYVL AGLFVIAVAV IIDRMWYLRR AILRGGSIVR RMAAMGRVNE 
QDLAALRDFA GRMPEGLLLD TALNHMNDAD HAGMNSRMDE AIMLVAPRLD RRMWVLDTIV
TLAPLLGLFG TIIGMFHAFS ILATPGHAPA EVTGGVADAL VATACGIFIA MIGLATFNML
QNQVRLIIHQ LETIRTMVLN RTDGAPVVVP KPMDNTKSCG E