Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3582 |
Symbol | |
ID | 5159387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009470 |
Strand | - |
Start bp | 32323 |
End bp | 32787 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640538888 |
Product | DNA mismatch endonuclease vsr |
Protein accession | YP_001220321 |
Protein GI | 148244084 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.684164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTGATA TTGTCGACCG GCAGACGCGC AGCCGGATGA TGGCGGGTAT CCGGTCGGCC AATACCCGAC CGGAGCGGAT GATCCGCAGT GCCCTCCATG TACGTGGCTT TCGTTACCGG CTGCATCCGC GTGCCCTGCC GGGCCGTCCC GACATCGTCC TGCCCCGCTA TCGCGCCGCT ATCTTCGTTC ATGGCTGCTT CTGGCATGGC CACGACTGCG GGCTGTTCCG GCTGCCCGGC ACCCGCCCGG AATTCTGGGC CGAGAAGATC CGGCGGAACC GGCAGAGAGA TGCCGCTGTC ATGAACGAGC TGGTCGCCAC TGGCTGGCGT GTCCTCACGA TCTGGGAATG TGCGATCAGG CGCAGGCGCG GCATGGTGCC GGAACCTGTC ATTGACGAAG CCGTCTCGTG GCTGAGATCC GGAGATGGAA ACCTGGAAAT TCGGGGGAAC AATGGCGCTG ACTGA
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Protein sequence | MPDIVDRQTR SRMMAGIRSA NTRPERMIRS ALHVRGFRYR LHPRALPGRP DIVLPRYRAA IFVHGCFWHG HDCGLFRLPG TRPEFWAEKI RRNRQRDAAV MNELVATGWR VLTIWECAIR RRRGMVPEPV IDEAVSWLRS GDGNLEIRGN NGAD
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