| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3523 |
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| Symbol | |
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| ID | 5159342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009469 |
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| Strand | + |
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| Start bp | 53338 |
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| End bp | 55731 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640538832 |
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| Product | type IV secretion system protein VirB4 |
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| Protein accession | YP_001220265 |
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| Protein GI | 148244027 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTTA ATCGAATCAG GGCGGAACGC AGCGCTGAAC GCTATTTGCC GTATCTCGGA
CATGTTCGGC CGGACATCCT GCTCATGGAT GACGGCAGCG TTCTTGCCAT GGCTGAAATC
CCCGGCGCTC CCTATGAGCT GGCAGCCGAT GCAGATCGCG CCGCGAGCCT GGTCACGGTC
AATGCGCTCT GCAAGAACGT CGCAGATGAC AATGTGACAC TGCACTCGGC CTTTGTCCGC
GGACCTGGGG CGGGGCAACT CGCACATGCG GTTATGCCCA ATGAGTTCGC GGCTTCGCTC
GATCGCGCCT ATCGCGAGCG CGTCCTTGCT GGGCGCCTCT ATCAAAACAC CTGGTATCTG
ACGGTGATTG TCTCCCCCCG CAATCCGCTG GGCGGCAAGG CGGGCGGCGC CACGGCCTCC
CTATTCGGTG GCAAACGGGA ACGCCAGAAG CCGCACGCGA CCGCCGAGGG CATCCGCCAG
CTAGAGGAGG TTTGGCAAAC CATCAGCCAA ACCCTTGCCC CCTATGATGT TCGCCGGCTG
GGCCTGCGGC CAGCCGCCAA TGGCCAGTTC TATTTCAGCG AAATCGCCGA GGCGCTGCGC
CTGATCCTGA CGGGCACGGC GGCGCCGGTG CCCCTGGTCA GCGGCCCGCT CGGTGCCGCC
CTCTACACCG ATCGCGCGAT CTTCGGCCGC CGCGTCTTTG AACTGCGCGG GCCGGGAGTG
TCTCGGTTCG GCGCGATATT CGGTTATCGC GAATATCCGT CTGAGACCTA TGCCGGCATG
TATGATGGGG TCTTTTCCCT GCCGTGCCCG GTGGTGATGG TCCATACTTT CGACTTTCAC
GCACGGCATA CCTCTGAAAA GCGGCTTGGC CTGAAAGCCG CCCAGATGAC GGCCGCGAAT
GACAAAGCCA GGTCGCAGAT CAGCGACCTT GCGGACGCAC AGGATCACCT CGCCTCCGGC
AAGATCGCCA TGGGCGAGCA CCACTTCTCG CTGACGGTCT ATGCGGACAC GATCGAGGAG
CTGGATCGGC TGTCCGGCTT AACCCGCACG GTGATCGCCA ATAGTGGCGG CGTCGTCGCG
CAAGAGAGTG CCGGGCTGGA AGCGGCCTAT TTCGCGCAAC TACCGGGCAA CAGAAAATGG
CGCACCCGGC CGGGGACCAT CACCACACGG AATTTCGCGG CCTTCTCTGG CTTCGAGGCT
TTTCCGCGCG GCCAACGTGC CGGCAAGTGG GGGCCGGCCA TGGCGCGCTT CCGCACCACG
GCGGGCACGG CCTATGATTA CGTGCCCCAT GTCGAGGATG TCGGCATGAC GGCGATCTTC
GGTAAGATCG GCCAGGGCAA AACCACGTTC ATGCTGTTCC TGCTGGCGCT GTTCCCGCAA
TATTTCGCGG CGCGCAACGG CGCGGTGGTG TTCTTCGACA AGGACCGGGG CGGCGAGTTG
CTGTGCCGTG CTGTCGGCGG CCGCTATCTG GTGGTGAGGG CAGGGCGGGA TAGCGGCCTG
GCGCCCCTCA AGGCGCTCGA CAACACCCCT GAATCGGTCG CCTTCCTGGT TCAGTGGCTC
ACCGCCCTGA TCCAGCAAGA CGGGCACGGC CCGCTCCCGC CCGAGGATGA CGCTCGCCTG
ACCCGAGGCG TTCAAGCCCT GCTGCGCCTG GCCCCGGACA TGCGCTCGCT GGCCGGGCTG
CGTCAGTTCC TCGACTGGCG CAATCCGATG GGGGCAGGCG CGCGCCTCGA ACGCTGGTGC
AAGGGCGGGT CGCTCGGCTG GGCCTTTGAT GGCGAACGTG ATGACGTGTC GCTTGAGGCA
ACCACGGTCG GGTTTGATCT GACGGCCATC CTCGACAATG GGACCGTCTG TGCTCCGGCC
GCGAATTACC TGCTCTATCG CATCAGCCAG GCGCTCGATG GCCGCCGCTT TGTGTTGTCC
TGTGACGAGT TCAATTTCTA TCTGCTCAAT CCGCTGTTCG CCAAAATCTG GGCGGATTTC
ATGCTCACCG TCCGCAAGAG CAACGCCGTG GTGCTTCTGG CGACGCAGGA GCCCGCGCCG
GTGCTCGATT CACCGCAGGG CGATAGCATC TTGCGCCAGT GCCAAACGCT CGTGTTCTGC
CCAACGCCTG GCGCGGAAGA ACATCTCTAC CGCAAACGGC TCAACTTCAC CGCCGGCGAG
TTCCGCGCCA TCGCCGAGGA CATGCTGCCC AACTCACGGC AACTGCTCAT CAAGCGGCAT
GGCGGCTCCG CGATCATCGA TTTCGACCTG TCCGCACTGC CTGAGTTCGT CGCGATCCTG
TCGAGCCGCA AATCCTCGGT TGGGTTTGTC GAACAGCTAC GCGCCACCCA CGGCGACGAT
CCGGCGGCCT GGCTGCCGGC GTTCATGGCG CGGTTCCACG AGGAAGTTGA ATAG
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| Protein sequence | MPVNRIRAER SAERYLPYLG HVRPDILLMD DGSVLAMAEI PGAPYELAAD ADRAASLVTV
NALCKNVADD NVTLHSAFVR GPGAGQLAHA VMPNEFAASL DRAYRERVLA GRLYQNTWYL
TVIVSPRNPL GGKAGGATAS LFGGKRERQK PHATAEGIRQ LEEVWQTISQ TLAPYDVRRL
GLRPAANGQF YFSEIAEALR LILTGTAAPV PLVSGPLGAA LYTDRAIFGR RVFELRGPGV
SRFGAIFGYR EYPSETYAGM YDGVFSLPCP VVMVHTFDFH ARHTSEKRLG LKAAQMTAAN
DKARSQISDL ADAQDHLASG KIAMGEHHFS LTVYADTIEE LDRLSGLTRT VIANSGGVVA
QESAGLEAAY FAQLPGNRKW RTRPGTITTR NFAAFSGFEA FPRGQRAGKW GPAMARFRTT
AGTAYDYVPH VEDVGMTAIF GKIGQGKTTF MLFLLALFPQ YFAARNGAVV FFDKDRGGEL
LCRAVGGRYL VVRAGRDSGL APLKALDNTP ESVAFLVQWL TALIQQDGHG PLPPEDDARL
TRGVQALLRL APDMRSLAGL RQFLDWRNPM GAGARLERWC KGGSLGWAFD GERDDVSLEA
TTVGFDLTAI LDNGTVCAPA ANYLLYRISQ ALDGRRFVLS CDEFNFYLLN PLFAKIWADF
MLTVRKSNAV VLLATQEPAP VLDSPQGDSI LRQCQTLVFC PTPGAEEHLY RKRLNFTAGE
FRAIAEDMLP NSRQLLIKRH GGSAIIDFDL SALPEFVAIL SSRKSSVGFV EQLRATHGDD
PAAWLPAFMA RFHEEVE
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