Gene Acry_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3393 
Symbol 
ID5159187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand
Start bp111675 
End bp112499 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID640538709 
Productintegrase catalytic subunit 
Protein accessionYP_001220142 
Protein GI148243903 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCCCCG GCAGATTACT CTACAAGGGG GAAAGGGGCG GGCCATTCCA TAAAATTCTA 
GCGCCCAGCC ATAAGCGGGA GGCGGTAGCT CATCTTCAGA GCCTGTTCGA GGTGAGCCAA
CGCCGGGCCT GCGATGCGCT GGGCGTGGAT CGGACCACGG TGCGGTATCA AAGCCGCCGC
CCGGATGATG CGGAGGCTCG CGAACGCATT CGCGTGCTTG CGGGCGAGCG CCGTCGATTT
GGCTATCGGC GCCTGCACTG GCTGCTCAGC CGCGAAGGAA TTTCCATGAA CCACAAGAAG
TTTCGGCGCC TTTACCGCGA AGAACGCCTT CAGGTTCGCC GTCGCGGCGG GCGAAAGCGG
GCCTTGGGCA CACGATCTCC GATGACCATT CCGCAGGGCT GCAATCAGCG CTGGTCGCTG
GATTTCGTCT CCGACGCCCT GACATGTGGG CGCAGGTTTC GCATCTTCGC CGTCGTGGAC
GATTTCAGCC GCGAATGCGT TCGCTTGATC GCCGACACGT CAATTTCGGG CGCCCGGCTG
GCACGCGAGT TGGATATGGC GATCACTGAG CGCGGGGCGC GCCCGCTCAT GGTGGTCAGC
GACGACGGCA CTGAGCTCAC CAGCATGTCG ATCCTGCGCT GGTCGAAAGA GCGGAACGTG
GAATGGCATT ACATCGCGCC CGGCAAGCCC CAGCAAAACG GGTTCGTCGA GAGCTTCAAC
GCCCGGCTCC GGGACGAGTG TCTGAACGAG ACCTTGTTCA CGAGCCTGCC TCAAGCGAGG
TCCGTGCTGG CCGCCTGGCG TCACGACTAC AATCCTGTTT CATAA
 
Protein sequence
MAPGRLLYKG ERGGPFHKIL APSHKREAVA HLQSLFEVSQ RRACDALGVD RTTVRYQSRR 
PDDAEARERI RVLAGERRRF GYRRLHWLLS REGISMNHKK FRRLYREERL QVRRRGGRKR
ALGTRSPMTI PQGCNQRWSL DFVSDALTCG RRFRIFAVVD DFSRECVRLI ADTSISGARL
ARELDMAITE RGARPLMVVS DDGTELTSMS ILRWSKERNV EWHYIAPGKP QQNGFVESFN
ARLRDECLNE TLFTSLPQAR SVLAAWRHDY NPVS