Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3379 |
Symbol | |
ID | 5159263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009468 |
Strand | + |
Start bp | 94823 |
End bp | 96502 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640538698 |
Product | transposase, IS4 family protein |
Protein accession | YP_001220131 |
Protein GI | 148243892 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTTCC GCATCAAACC ATCAGGTGGC CGTCGCTACC TGCAGATCGT CGAGAACAAG CGGGTCGATG GCAAGGTCCG CCAGGTTGTG CGGCTGACCA TCGGCCGGAT GGACGAACTC GAAGCAAGCG GCCAGCTCGC GAGGCTCCTC ACCTCCGGCG CCCGCCATTG CGAGCAGATG ATGCTGCTCT CCGCCATCGA GAATGAGGCG ACCACGCTGA GCATGCGCCG GTTCGGCGCG CCATTGCTGT TCGGCCGACT GTGGCAGGAG AGCGGGATCG CTGCGGTGTT CGAGGAGCTG CTGGCCGGGC GGCAGTTCGA GTTCCCGGTC GAGCGCGCGG TGTTCGCCAC CGTGCTCCAC CGGATCATGG TCTCGGGCTC GGATCGCGCC TGCGACAAAT GGCTCGAGGA TTACGACATT CCCGGCACCG AGGAGCTCGG CCTGCATCAC CTCTACCGCG CCATGGCCTG GCTCGGCGAA GAGCTGCCGG ACGAGGAACA GGGGGATGCC ACGCCCTTTG CACCGCGGAC GGTGAAGGAT CTGGTGGAAG AGCGGCTCTT CGCCCGACAG CATGATCTGT TCACCGACCT CTCGGTCGTG TTCATGGACA CCACCTCGCT GTATTTCGAA GGTGCCGACG GCGAGACGCT GGGCGCGCGG GGCCACTCCA AGGATTACCG CCCACAGCTC GCGCAGATGA TCCTGGGCGT GGTGATCGAT CAGGACGGCC GGCCGATCTG CACCGAGATG TGGCCGGGCA ACACCGCCGA TGTCTCGGTA CTGGTGCCGG TGATCGACCG CCTGCGGTCG CGCTTCGGCA TCACCCGGGT CTGCGTTGTC GCCGATCGCG GCATGATCAG CGCCGCGACG ATCGCCGCGC TGGAGGAGCG CGGACTGGAA TACGTCCTCG GCGCAAGGGA ACGCACCGAC CGCATCGTCC GCGAGGTGGT GCTGGCCGAT GAGCGCCCCT ACATCCCGCT CTGCCTCGAG CGCGCCGGTG GCGACGAGAC CCAGCTCTTC ATCAAGGAGG TCAAAGTCGC GGGCAAGCAT TACATCGTCT GCCGCAACGA GGCGGTGGCC ATCGAAGAGG CCGAGACCAG GCGCCAGGTG GTCGCCGCCC TCGATCGTCA GCTGACGCGA GGCGACAAGG CGCTGATCGG CAACTCCGCC TATCGCCGCT TCCTGCGCCC AGTCAGCGAC GCAAAGCCCG GCCGCAAGAG CAAGCTGTTC GAGATCGACG CCGGCAAGCT CGCCGAGGAA GCCCGCTTCG ACGGCGTCTT CGTGCTGCGC TCCAATGCCA GGATCTCGCC GCTGCAGGCG GTGCTCCGCT ACCGGGACCT GCAGAATGTC GAACAGCTGT TCCGTGTGGC GAAGGCGACG ATGCGCACCC GGCCAATCTA CCATTCCTCC GCCGCCGCCA TCCGCGGCCA TGTGTTCTGT TCTTTTCTCG CGCTGATCCT GCACCAGGCG CTCGACGAAA AACTCCGCCG GGCCGGCAAG CGCGTCGAAT GGGCCGATCT CCTTCGTGAT CTCGACAGAC TGCAGCACGG CGAAATCAGT CAGAACGGCA AGCGCTGGCA GCTGCGCACC GAAGCCGGCG TTGCGGCGGC CACAGCCTTC AAAGCCGCCC GCATCGCCCT GCCGCCCCGT CTGCAGACCC CCCAGCAAGC CGTAACCTGA
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Protein sequence | MFFRIKPSGG RRYLQIVENK RVDGKVRQVV RLTIGRMDEL EASGQLARLL TSGARHCEQM MLLSAIENEA TTLSMRRFGA PLLFGRLWQE SGIAAVFEEL LAGRQFEFPV ERAVFATVLH RIMVSGSDRA CDKWLEDYDI PGTEELGLHH LYRAMAWLGE ELPDEEQGDA TPFAPRTVKD LVEERLFARQ HDLFTDLSVV FMDTTSLYFE GADGETLGAR GHSKDYRPQL AQMILGVVID QDGRPICTEM WPGNTADVSV LVPVIDRLRS RFGITRVCVV ADRGMISAAT IAALEERGLE YVLGARERTD RIVREVVLAD ERPYIPLCLE RAGGDETQLF IKEVKVAGKH YIVCRNEAVA IEEAETRRQV VAALDRQLTR GDKALIGNSA YRRFLRPVSD AKPGRKSKLF EIDAGKLAEE ARFDGVFVLR SNARISPLQA VLRYRDLQNV EQLFRVAKAT MRTRPIYHSS AAAIRGHVFC SFLALILHQA LDEKLRRAGK RVEWADLLRD LDRLQHGEIS QNGKRWQLRT EAGVAAATAF KAARIALPPR LQTPQQAVT
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