Gene Acry_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3319 
Symbol 
ID5159236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand+ 
Start bp33127 
End bp33804 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID640538640 
ProductCRISPR-associated Cse3 family protein 
Protein accessionYP_001220073 
Protein GI148243834 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.148514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCTGT CAAAGGCGCG CTTGAACCAC GATCAGAAGG CGGTCGCGGC CCTCGCTTCG 
GTTCTGGTGC CTGAAGACGG CTCGGCCCGG GTTGCGGCGA CGCATCATCT CGTCTGGTCA 
CTTTTTGCCG GAGACGCGGA TCGGAAGCGC GACTTCCTGT GGCGTGAAGA GCGTCCGGGC 
CATTTTCTTA TCCTCTCGCC CGACCGGCCA GGCGACGGGG GCGGGCTCTG CACGGTCGAG 
AGCAAGGAAT TCACACCGGC GTTGTCGGCC GGCGACAGGC TTGGCTTTTC CCTGCGTGCG 
AACGCGGTTG TAAGCCGGGG AGAGCCCGGC TCCGGCCGGG GCAAGCGTCA TGACGTCGTG 
ATGGATGTCC TTCGTCATCA TCCTAAGGGC GAGCGTGCAT CTCATCGCCT GGGTCTGGTC 
ACCGAGGCCG GAGCGGCCTG GCTTGTCCGC CAGGGTGAAC GTCACGGTTT CGTAATCGAA 
GGCCAGCCGG CCTGCGATGG CTACGAGGCA ATCCGGGTGT TGCGTGGAAG GGGTGAGAAG 
CCTCTGACCT TCAGCCAGAT TGATTTCGCG GGAGTTTTAA GCGTCACCGA TCCAGCGCGC 
TTCATCGCTG CCATTGGCCA TGGCTTCGGG CGGGCGCGGG CCTTTGGCTG TGGCCTCATG 
CTGATCCGCC GTGTCTGA
 
Protein sequence
MWLSKARLNH DQKAVAALAS VLVPEDGSAR VAATHHLVWS LFAGDADRKR DFLWREERPG 
HFLILSPDRP GDGGGLCTVE SKEFTPALSA GDRLGFSLRA NAVVSRGEPG SGRGKRHDVV 
MDVLRHHPKG ERASHRLGLV TEAGAAWLVR QGERHGFVIE GQPACDGYEA IRVLRGRGEK 
PLTFSQIDFA GVLSVTDPAR FIAAIGHGFG RARAFGCGLM LIRRV