Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3235 |
Symbol | |
ID | 5158951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009467 |
Strand | - |
Start bp | 149876 |
End bp | 151402 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640538564 |
Product | integrase catalytic subunit |
Protein accession | YP_001219997 |
Protein GI | 148243757 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTTT TGAGCATTAT CCGCCGGTGG CATAAGCGTG AGTATGTGCC GATCCGGGAG ATTTCACGGC GGCTTGGCGT GTCACGGAAC ACAATCCGCA AATATCTGCG GTCTGATCAG ATTGAGCCGA AGTTTCAGGT TCCGGACCGG CCGAGCAAGC TGGACCCGTA TGCCGAGAAG TTGGCCCTCT GGCTCCGGCG TGAGGGGAAC CGGCCGCGCA AGCAGCGGCG GACGGTCAAG CAATTGCACG GAGACCTGGT CAGCCTTGGC TATGACGGCT CCTACAACCG GGTAGCGGCA TTTGCCCGCG CCTGGAAGGA AGAATGCAAA CTTCTGCAGC AGACCGCCGG GCGTGGCACC TTTGTGCCGC TGTCTTTTGC GCCCGGCGAA GCCTTTCAGT TCGACTGGAG CGAGGATTTC GCTGTCATTG GCAGCGCCCG CGTCAAGCTG CAGGTGGCGC ACACCAAGCT CTGCTACAGC CGCGCGTTCA TCATCCGCGC CTATCTGCTG CAGACGCATG AGATGCTGTT CGATGCGCAC AACCACGCCT TCCGGGCGCT TGGCGGCGTG CCGCGGCGGG GCATTTACGA CAACATGAGC ACTGCCGTGG ACAAGGTCGG TCGCGGCAAG GAGCGCAGCG TCAACCTGCG CTTCCAGGCG ATGACCAGCC ATTATCTCTT CGAGCCCGAT TTCTGCAATC GCGCCGCAGG CTGGGAGAAG GGGCAAGTTG AAAAGAACGT CCAGGATGCC CGCCATCGCC TGTGGCAATC CATGCCGCCG TTCGAAACCC TCGACGCCCT CAATGATTGG CTGGAACAGC GCTGCCGGGA GCTTTGGGAG CAGACCGCAC ATGGCGGCGA GCCAGGGAGC ATTGCCGATG TCTGGGCCCA GGAGGTCGAG AGCCTCATGC CCGTGGGGCG GCCATTCGAT GGGTTCGTGG AATTCACCAA GCGCGTCTCC TCGACCTGCC TGATCCACCT GGAGCGCAAC CGCTACAGTG TGCCGGCTTC TTTTGCCAAC CGGCCGGTCA GCCTGCGGGT TTACCCCAAC AGGCTGGTGG TGGCGGCGGA AGGGCAAATC ATTTGCGAAC ACCCCCGCGT CGTCGAGCGG ACACACGGTC CCGGCCGCAC GATTTATGAC TGGCGGCATT ATCTGGCGGT GATCCAGCGC AAGCCGGGCG CCTTGCGCAA CGGCGCGCCG TTCCTGGAAT TGCCCGATGC GTTCCGGCAT TTGCAGCGGC ATCTCCTGCA GCATCCAGGC GGTGACCGCG ATATGGTGGA GATCCTGGCC CTGGTGCTGC ACCATGATGA GCAACTGGTT CTGATGGCGG CGGAACTGGC CTTGGCCGAT GGCGTGCCGT CCAAGACGCA TATCCTCAAC CGGCTCCACA GGCTGATCGA CGGCAAACAG GCGCCGCCGC CAGTCATCAC CGCACCACAG GCGTTGACAT TGGCCCATGA GCCCAGGGCC GATGTCGAGC GCTACGATAC CCTGCGTCAA ACCGGGGAGA CTCGCCATGC GTCATGA
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Protein sequence | MAFLSIIRRW HKREYVPIRE ISRRLGVSRN TIRKYLRSDQ IEPKFQVPDR PSKLDPYAEK LALWLRREGN RPRKQRRTVK QLHGDLVSLG YDGSYNRVAA FARAWKEECK LLQQTAGRGT FVPLSFAPGE AFQFDWSEDF AVIGSARVKL QVAHTKLCYS RAFIIRAYLL QTHEMLFDAH NHAFRALGGV PRRGIYDNMS TAVDKVGRGK ERSVNLRFQA MTSHYLFEPD FCNRAAGWEK GQVEKNVQDA RHRLWQSMPP FETLDALNDW LEQRCRELWE QTAHGGEPGS IADVWAQEVE SLMPVGRPFD GFVEFTKRVS STCLIHLERN RYSVPASFAN RPVSLRVYPN RLVVAAEGQI ICEHPRVVER THGPGRTIYD WRHYLAVIQR KPGALRNGAP FLELPDAFRH LQRHLLQHPG GDRDMVEILA LVLHHDEQLV LMAAELALAD GVPSKTHILN RLHRLIDGKQ APPPVITAPQ ALTLAHEPRA DVERYDTLRQ TGETRHAS
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