| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3002 |
|---|
| Symbol | |
|---|
| ID | 5160730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 3284087 |
|---|
| End bp | 3284965 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640554932 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001236111 |
|---|
| Protein GI | 148261984 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGAC GCACCCTCTT CGGCGGCCGG CTGCTGCCGG CCGTCCTGGT GGCCCCGCAG
CTCGCCATCA CGATCCTGTT CTTCCTGCTT CCCGCCTGGC GCGCTTTCTC CGAAAGCGTC
CAGGCGACGG ACGCCTTCGG GCTGAACACC ACCTTCGTCG GCCTCGCCAA TTTCCGCGCG
CTGCTGGACT CGCCGGTCTA TCAGGCGGCG CTGCTGCGCA CCGTCGCCTT CTGTGCCGCG
GTCACCGTGC TGTCGATGGC GGGCGGCCTC GTCCTCGCCT GCTTCGCCAA CCGCGGCATA
CGCGGCCAGT CGGTCTATCG CGTCCTGCTA ATCTGGCCCT ACGCGATCGC ACCGGCGCTG
GCCTCGGTGA TCTTCGTCTT CCTGCTCCAG CCGCAGATCG GGCTGCTCTC CAACGGCCTT
TCCCGGCTCG GCATCGATTT CAACTACGCC ACCAACGGCA ACGACGCGTT TGGCCTGATC
GTGCTGATCG CCGCCTGGAA GCAGGTGAGC TACAATTTCA TCTTCTACCT TGCGGGTCTG
CAATCGGTGC CCGCCTCGGT GATCGAGGCG GCGACGCTCG ACGGCGCGCG GGGCTTCTAC
CGGTTCCGCA CCGTGATCTG GCCGCTGCTC GCCCCCACCA CCTTCTTCCT GCTGGTGATC
AACACCGTCT ACGCCGCCTT CGACGCCTTC GCGCTGATCT TCGCGCTCAC CGGCGGCGGC
CCGGGCAGCT CGACGACGAC GCTGGTGGTC AAGGTCTATC GCGACGGGGT GATCAATCTC
GATCTCGGCG GCTCGGCCGC GCAATCGGTC ATCCTGATGG CGCTGATCGT GGTCCTCACC
ACGATCCAGT TCCGCTATAC CGGCAAGCGC GCGACATGA
|
|---|
| Protein sequence | MERRTLFGGR LLPAVLVAPQ LAITILFFLL PAWRAFSESV QATDAFGLNT TFVGLANFRA
LLDSPVYQAA LLRTVAFCAA VTVLSMAGGL VLACFANRGI RGQSVYRVLL IWPYAIAPAL
ASVIFVFLLQ PQIGLLSNGL SRLGIDFNYA TNGNDAFGLI VLIAAWKQVS YNFIFYLAGL
QSVPASVIEA ATLDGARGFY RFRTVIWPLL APTTFFLLVI NTVYAAFDAF ALIFALTGGG
PGSSTTTLVV KVYRDGVINL DLGGSAAQSV ILMALIVVLT TIQFRYTGKR AT
|
|---|
| |