Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_2392 |
Symbol | |
ID | 5160700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2634307 |
End bp | 2635452 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640554318 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001235505 |
Protein GI | 148261378 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.733232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGCAACC GCCGCGCCGC CCGGCATTCT GGTGCGGCAT CGTCGGATTT GAAGGGGATC ATGGGTCTGC CTGCCGCCGC GTCCGGATCG ACATCCTGCC ATGTGCTCGC CGCCGCGGCG TCGGGCGTGA CGGCGTTCAT CCGCGGAGCC GGGGCGGATC CGGACCTCGT GCTCGGCGAG GCGGGGTTCG ATCCGCGCGA CCTCGAGGAC CCGCGCGCGA CCGTGCCGCT CGCCCGCTAT GTCGCGATGA TGGAACGGGC GGCGGCGCGC AGCGGGGATT CGCATTTCGG CCTGCGCTTC GGCCAGCAGT TCCAGCCGGA GGCGCTCGGG CTGATCGGCG AGCTCGCGCT GGCGGCGCCG GATGTCGGCA CCGGGCTTGC CGCCTTCGCC CGGCATTTCA TCCAGCACCA GCAGAATACC GAAACCCGCC TCGCGCGGGA GGGCCGCTCG CTGCGGCTGG AATACCGGAT CGTCGATCCG CGGATCTGGT CGCGCCGGCA GGATGCCGAG CTGACGATGG GGATGTTCGC CAACCTGCTG CGGCGCGCGC TCGGCGGCGC GCTGGAGATC GAGGAGGTGT GGTTCGAGCA TCCGGCGCCG GAACAGGCGC AGGCGCATGC GGCGGCGTTC GGCGCGCCGG TGTTCTTCGC CGCGCCGGCG AACGCGATCA GCTTTCGCGC GGCGGGGCTG GAGCGGCCGA TGCCGGCGCG CGACCCGGCG CGCTTCGCCG CACTGGCCGA GGAGCTGCGC CGGATCGGCG GCGGCGGCGG GCCGCGCGAC CTGCTCGGCG CGGTGACCAG CGAGATCCGC CGGAAGCTGC CAGAGGGGCC GGCCGGGATC GACCGCGTGG CCGCGAGCCT CGGCCTGCCG CGCTGGACGC TGCAGCGCCG CCTCGCCGAG CACGGGCTCA CCTATTCGGA CTGCATCGAC CAGGTGCGGG CGCGGCTCGC GCTGATGTAT CTCGCCGAGC CGCATCTCTC GATCGCCACG ATCGCCGAAC TGCTCGGCTA TTCCGAGGTG AGCGCCTTTT CGCGGGCCTG CCGCCGGCTG CACGGCGCCT CGCCCGAGGC GGTGCGGCGC AAGCTCGGCG CCCGCGCGGC GCCCGACAGC ACGACCGGGC GGGAAAGCCC GGCGCACACG GCCTGA
|
Protein sequence | MRNRRAARHS GAASSDLKGI MGLPAAASGS TSCHVLAAAA SGVTAFIRGA GADPDLVLGE AGFDPRDLED PRATVPLARY VAMMERAAAR SGDSHFGLRF GQQFQPEALG LIGELALAAP DVGTGLAAFA RHFIQHQQNT ETRLAREGRS LRLEYRIVDP RIWSRRQDAE LTMGMFANLL RRALGGALEI EEVWFEHPAP EQAQAHAAAF GAPVFFAAPA NAISFRAAGL ERPMPARDPA RFAALAEELR RIGGGGGPRD LLGAVTSEIR RKLPEGPAGI DRVAASLGLP RWTLQRRLAE HGLTYSDCID QVRARLALMY LAEPHLSIAT IAELLGYSEV SAFSRACRRL HGASPEAVRR KLGARAAPDS TTGRESPAHT A
|
| |