| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2381 |
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| Symbol | |
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| ID | 5160579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 2617229 |
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| End bp | 2619601 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640554307 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001235494 |
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| Protein GI | 148261367 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.716735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTG AATTTGATCA TTTTCCATTC GCTGTCGCAA AGAAACTGAA ATTGAGACAG
TCAGGCCAGA CTACCCTCGA TCTGTTGCCG CAAACACGAC GTCAGATCGA CATATCGCTA
CTGGACATGA GAACCGCGCT GGTCCCCCGG ATGGTGGTCA CAGGCGGGCT CGTCTCGGGT
GCGCTGTGCT GGAGCTTCTG GAACCGGCTG CATGGCGCGC CGTTGCTGAC CGGTGGCTTC
GCCGGCCTGT TCACCGGCTA CGTCCTGCTC TCGATCTCCG CGATTCTCTG GGCCCGCCGA
CCGGCGGACG TGCGGCCCGT CGTTTTCAAG CTCGCCTTTT CCGGCCTGGC CCTCATGATC
GGCATATTCT GGTCGTTCAT CCTGATCGGC GGGCTGCACC ATGCCGATCC GGTGCAGACG
AGCATGCTCT ACGCGGTCGC GATCGGGCTG ATGTCGACCT CGGCCTTCTC GGGTCCAGCA
CTCTACGCCC TCGCCCTCTG GACACCGGTG ACGATCGGCT CCGTCATCGC CATCATGGCG
GACTCGGCAA TCCCCCCGGC CGCGACGCTG ATCGGTCTCG CGAGCTACGC CTTCCTCACC
TTCTCGACCA TCCTCTACGT CAACGCCAAC ACGATGGAGC GCGAGTTGCG CCGCCTCGAG
GCCGAGCGCC AGAGCGAGGT AATCAACCTC CTCCTCCGCG ATTTCGAGGA GGGGGCGAGC
GACTTCCTCT GGGAGACCGA TGCCTCGCTG ACGCTGATCC GCCCCTCGCT GCGCTTCGCC
GAGGTCGCGC GTTCGACGCC GGCGGAACTC GCCAGCATGT CGATCATCCG CTTTCTCGTC
GAACACGGCC GAGCCGGGCC GGATCATTCG TGCAACGCCG CGGTCGGCAA CCTGATCCAC
CGGATCGGGC GGCGGGAAAC CTTCAATGAA CCCCGGACCC CGCTGCATTT CAGCAACGAG
GAGCGGTGCT GGTCGATTGC CGGCAAGCCG GTGTTCGACC GCGAAGGGGT CTTCATCGGC
TATCGCGGCG TCGGGTCCGA CGTCACCGCC CACCGCCTGG CCGAACGCAA GATCGCCCAC
ATCGCCAGCC ACGACAGCCT GACCGGCCTC GGCAACCGCA TGAGTTTCGA CGAGGCGCTA
CAGGCGGCCT GCTCGGGGCC GGTCGGTGTC GGCACCGGGC TGATCTGTCT CGACCTCGAC
CATTTCAAGT CGGTGAACGA CCGTTTCGGC CACAAGACCG GCGACGAACT GCTGCATGCG
GTCGCCCGCC GCATCCTGTC ATGCGTGCGC AGCCATGATC GCTGCTTCCG CCTCGGCGGC
GACGAATTCG CGATCCTCCT GCCCGATGCG ACGATCGCCG ATGCCGAGGC GGTCACCGGC
CGTATCATCG ATCGGCTGGC CGATCCCTTT CGCCTCGCCG ACGTCACGGT GGCGATCGGC
TCCTGCGCCG GCATCGCGAT GATCACCCGC CCCGGCATCC TGCCGGAGGA TGCCCGCCAT
GCCGCCGACC TCGCGCTCTA CCGCGCCAAG GCGAGCGGCC GTGGCTCCGC CCGCCTGTTC
GATCCGGAAA ACGACCGGCA CACGACCCGC CTCCGCCAGA TCGATGCCGC GCTGGTGAAC
GAATTCGAAA AGCAGGTTTT CTTCCTCGAA TACCAGCCGA TCGTCCGGCT CGACAGCGGC
GCGGTGACCA CCGTCGAGGC GCTGGTCCGC TGGAAGCATC CGGAATACGG CATTCTCCCG
CCGGACCAGT TCATTCGGGC TTCGGAGCAT AACGGCGCCA TCATTCGCAT CGGCGCCTTC
GTCATCGAGG CCGCCTGCGC CTACGCCGCC ACCCTGCCCG ATCACATCGC GGTTGCGGTC
AATCTCTCGC CCGTACAGCT TCACGATCCG GCGCTGATCG AGCGGATCGG CGCCGCCCTC
GTCCGCCACC GCCTCGGCCC GGGCCGGATC GAGTTCGAAC TGACCGAAAC CGCGATCCTC
GACGTCTCGC CCGAGACCCG CCGCATCCTT GAGGCGATCA CGGCACTCGG TTGCCGCCTC
GCGCTCGACG ATTTCGGCTC CGGCTATTCC TCGATTTCGA CCCTGTACTA TTTCCGCTTC
GACCGGCTGA AGATCGACCG TTCCCTGATC AAGGACGCGA TGGATGATCC CCGCCGGCGG
ACCATTCTCT TCCATATCGG CCGCATGGCG CGCGATGTCG CCCTCACCAT CACCGCAGAG
GGCATGGAAA CCGATCATCA CCGCGTCAGC CTGATCGAAC TCGGCTTCGA GGAGGGACAG
GGCAGCCTGT TCGCGATGCC GATGAGCGGC GAGGCCCTGC ACGACTGGCT CCGACTCCGC
CTCGTCCCCA GCTCGGGCCG CCTGTTCGGC TGA
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| Protein sequence | MDFEFDHFPF AVAKKLKLRQ SGQTTLDLLP QTRRQIDISL LDMRTALVPR MVVTGGLVSG
ALCWSFWNRL HGAPLLTGGF AGLFTGYVLL SISAILWARR PADVRPVVFK LAFSGLALMI
GIFWSFILIG GLHHADPVQT SMLYAVAIGL MSTSAFSGPA LYALALWTPV TIGSVIAIMA
DSAIPPAATL IGLASYAFLT FSTILYVNAN TMERELRRLE AERQSEVINL LLRDFEEGAS
DFLWETDASL TLIRPSLRFA EVARSTPAEL ASMSIIRFLV EHGRAGPDHS CNAAVGNLIH
RIGRRETFNE PRTPLHFSNE ERCWSIAGKP VFDREGVFIG YRGVGSDVTA HRLAERKIAH
IASHDSLTGL GNRMSFDEAL QAACSGPVGV GTGLICLDLD HFKSVNDRFG HKTGDELLHA
VARRILSCVR SHDRCFRLGG DEFAILLPDA TIADAEAVTG RIIDRLADPF RLADVTVAIG
SCAGIAMITR PGILPEDARH AADLALYRAK ASGRGSARLF DPENDRHTTR LRQIDAALVN
EFEKQVFFLE YQPIVRLDSG AVTTVEALVR WKHPEYGILP PDQFIRASEH NGAIIRIGAF
VIEAACAYAA TLPDHIAVAV NLSPVQLHDP ALIERIGAAL VRHRLGPGRI EFELTETAIL
DVSPETRRIL EAITALGCRL ALDDFGSGYS SISTLYYFRF DRLKIDRSLI KDAMDDPRRR
TILFHIGRMA RDVALTITAE GMETDHHRVS LIELGFEEGQ GSLFAMPMSG EALHDWLRLR
LVPSSGRLFG
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