Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_2303 |
Symbol | |
ID | 5159456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2533450 |
End bp | 2534997 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640554224 |
Product | integrase catalytic subunit |
Protein accession | YP_001235417 |
Protein GI | 148261290 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.268136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGTGG AGCGGATTGC GATGCGCGAT GTGCGCGAGA TTGTCAGATT GAGGATGGCG GGGCTTTCGA CCCGCCAGGT AGGGATCCGG GTCGGGGTTG CGGCATCGAC GGTGCGCTTG ACGCTGCGGC GACTGGAGGC GGCCGGGCTC GATGGGCCAG GGGCTCTGGC GCTGTCCGAA GCGGCCTTGG AAAGGCGCTT GTTCGAAGGC TCGGCGGGCA AGCGGCCGGG GCATCGACGT GTGGATGAGC CGGACTGGGG GCGTATCCGC CGCGAGTTGC AGCGCAAGCA CGTGACGCTG TCGATCCTGT GGGACGAGTA TATCGCCGAG CACCCGGACG GATATCGCTA CAGCCGGTTC TGCGAGCTCT ACCGGAGCTG GGAAGCCCGG CTACCGGTGA CGATGCGCCA GACCCACGCA TCGGGCGAGA AGCTGTTCGT CGATTATGCC GGCGACACGG TGCCGGTGGT GATCGACCGA CTCACCGGCG AGACGCGTGC GGCCCAGATC TTCGTCGCCG TTCTCGGCGC ATCGAGCTTC ACCTATGCTG AGGCGACCTG GACCCAGACC CTGCCGGACT GGATCGAGGC GCATAATCGC ACTCTGGCAG CAATTGGCGG CGTGCCGGCG CTGCTGGTGC CCGACAACGC CAGGGTCGCG ATCATCCGCG CCTGCCTCTA CGATCCACAG GTCAACCGGA CCTACACCGA TATGGCGCGC CATTACGGCA CGGCCATTCT CCCGGCGCGG CCGCGGCGGC CGCGTGACAA GGCGAAGGTC GAGGTGGCGG TTTTGCTGGC GGAGCGGTGG CTGCTGGGCA AGCTGCGCAA CCGGGCATTT TACAGCCTCG CCGAACTGAA TGCCGCGATC GCTGAATTCT GCCGCTGGCT GAACGAGGAG CGGGTCGTCC GTCGCCTGGG GGCGACAAGA CGGCATCTGC TGGAAACACT CGATCGTCCC GCGCTGAAGG AACTGCCGGC CGAACCCTAT GTGCTGGCGC AATGGCGGCG CCGGCGGGTC GGCATCGATT ATCACGTCGA GATCGAGAAG CATTTTTACT CCGTCCCCTA CCGGCACGCC CGCGCCGAGG TCGAGGCCCG GTTCACCGTG CGCACGGTCG AGATCTTTCT CCGTGGCGAG CGGATCGCCG TGCATGCGCG CGGGTCGGGC AACGGCAAGC ACACGACGAT CGCCGAGCAC ATGCCCTCGA GCCACCGGCG TTACGGCGAC TGGACCATCG CGCGGATCCA TCAGGAAGCC GCACGGCTCG GCCCGTCGGT CGCGACACTC TGCACCCTGA TCCTCGAACG CCGGCCTCAT CCGGAGCAGG GGTTCCGCGC CTGCATCGGC ATCCTTCGCC TGGCCCGCAG TGTTGGCGCC GACCGGCTCG ACGCCGCAGC CGAGCGCGCG CTCACCATCG GCACCCTGAC CTACGGCTCG GTCAAATCCA TCCTCGATCA CCGGCTGGAG CGAGCCGCCG GCACCGCCAG TCCCGATCCC ACCCCGATCC GCCACCCCAA CATCAGGGGC GGCGGATATT TCCACTGA
|
Protein sequence | MPVERIAMRD VREIVRLRMA GLSTRQVGIR VGVAASTVRL TLRRLEAAGL DGPGALALSE AALERRLFEG SAGKRPGHRR VDEPDWGRIR RELQRKHVTL SILWDEYIAE HPDGYRYSRF CELYRSWEAR LPVTMRQTHA SGEKLFVDYA GDTVPVVIDR LTGETRAAQI FVAVLGASSF TYAEATWTQT LPDWIEAHNR TLAAIGGVPA LLVPDNARVA IIRACLYDPQ VNRTYTDMAR HYGTAILPAR PRRPRDKAKV EVAVLLAERW LLGKLRNRAF YSLAELNAAI AEFCRWLNEE RVVRRLGATR RHLLETLDRP ALKELPAEPY VLAQWRRRRV GIDYHVEIEK HFYSVPYRHA RAEVEARFTV RTVEIFLRGE RIAVHARGSG NGKHTTIAEH MPSSHRRYGD WTIARIHQEA ARLGPSVATL CTLILERRPH PEQGFRACIG ILRLARSVGA DRLDAAAERA LTIGTLTYGS VKSILDHRLE RAAGTASPDP TPIRHPNIRG GGYFH
|
| |