Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_2094 |
Symbol | |
ID | 5161864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2306806 |
End bp | 2308746 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640554016 |
Product | Rhs element Vgr protein |
Protein accession | YP_001235212 |
Protein GI | 148261085 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.730907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTA ATATCGATCT GCTTGACCTC CAGACATCGC TTGGTAGCGG CGTCCTGACG CTGGTCGGGG TCAATGGCCA GGCGGCGCTC AGCCAGTGCT TCCGGTATAC GCTGTCGGTG CGCGCGGGTG CCGGCGGGCT CGATCCGAAC GATCTTCTAT ACACGTCGGT CACCGTCGCG ATCGGGTCCG ACGGGACGAA CCAGACCTAC ATCAATGGCC TCGTCTCGTC CGTGGTCCAG AAGCCCGGCA ACGCGGCCGG TACCGCGATC GCCGCCGGCC TCGAACTCTG GGATCATGAA CTGACGGTCG TTCCCGCCCT CTGGTTCCTC GGGCAGACAC TCGATTGCCG GATATTCCAG AACAAGACCG CCGTTGCCAT CGTCAAGGAA GTTCTGGACG AATTCGAGAT TACTTCATAC GAGCTGCCGA GTGGCGGGAC GAGCTATGAC TATACAGTCA TGTTCAATGA GACCTATCTG GACTTCATAA ATCGCATCCT CGCGCGCGAT GGGCTTTTCT ATTATTTCGT CCACGAAAAG TCCGGACACA AGTTCGTCGT CGCCAGCAGC TCGCAATCTC TCCCCAAGTT GGGAGCCGTC AAATTCGCCG GGCAGACCGC GACCGAAGTC GGGGTTCATA CGCTCAGCCG CGCCGACAGC ACGACCATCG GCAAGTTCAT CGGGAACGAC TACAACTATG AAACGGCATC CACCGGCCTC GTCTCCGATG CGGATACCGT GCTCAAGGCG AAGGGGGCGG CAACCCGCAA ATTCTATCGC TACCCGTCGG AAAATCCCGT CAAGGAGGCG ATCGGACAGC AGGTGCGCCA TCAGAACGAG GCGGCCGAGG TTCGTGCCGG GTTGTTCGCC GGTGGCGGCA ACACCCCGTC GATGCTCGCT CCCGGCAACG CCGTCACCAT CACCGGCGAT CCCTTCGGCA TCGGCGATTA CGTCATTGCG GCGGCCGCGC TCAGCGTGAC CGATCACGCC GGCATCGGCG GAGGGACGGC CACCGTCGAT GTCGCATTCA CCCTGTTCGA CGCATCCGTT CCCTGGCGGC CGGAACTCCT GCCGAAGCCG CAGATCGCCG GCTTGCAGTC CGCCCTCGTC GTCGGGCCCT CGGGCGATGA AATTTACACG AACAAGTACG GCCGGGTGAA GGTTCAGTTC AACTGGGACA CGCGCGGCAA GAAGGACGAG AACTCGAGTT GCTGGGTTCG CGTGATCCAG CCCTGGGCCG GCGCCGGCTG GGGGTTCCAG TTCCTTCCGC GCATCGGCCA GGAGGTCGCC ATCAGCTTCC TCGAGAGCGA CATCGACCGG CCGGTCGTGA TCGGTTCCTT CTACAACTCC GGCCAGGTCA GCCTGTTCAA TCTCCCCGCC GAGCAGAACA AGGCGGGATT CCGCTCCCGC TCAACCAAGA GTGGCGGGAC GTCGAACTAC AGCGAATTCA GTATCGACGA TACCAAGGGT TCGGAGGTTG TCCTGCTGCA TGCGGAGCGG GATTATACGG TCGAGGTCGA GCATGATGAA ACCCGCACGA TCGGCAACAA CCGCACGGTG ACCGTCAAGA AGGACGAGGC GATCACCGTG GACGGCAACC AGACCGAGAC GGTGAAAGGA AATCGTACCT TCGAGGTCAA GCAGGACCAT TCCGAGACGG TCGATGGCAA CCAGTCCGTC ACGGTCAAGG GCAAGCAGAG CGTGTCGGTG CAGGGGCAGC AATCCGTATC CGTGACCGGG GCCGTCACCT ATGAGTCGAT GGAGTCGATC ACGCTGAAAG TGGGCGGAAA CAGCATCAAG ATCGACATGA CGGGCATCAC GCTCTCCGGC ACCCTCATCA AGATCAATGC CCAGGCCGAG CTGTCGACGA GCGGCGCGAT TGCGCAGCAT TCCGGCTCGG GGATGCTGAA ACTCCAGGGC GGGATCATCA TGGTGAACTG A
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Protein sequence | MTTNIDLLDL QTSLGSGVLT LVGVNGQAAL SQCFRYTLSV RAGAGGLDPN DLLYTSVTVA IGSDGTNQTY INGLVSSVVQ KPGNAAGTAI AAGLELWDHE LTVVPALWFL GQTLDCRIFQ NKTAVAIVKE VLDEFEITSY ELPSGGTSYD YTVMFNETYL DFINRILARD GLFYYFVHEK SGHKFVVASS SQSLPKLGAV KFAGQTATEV GVHTLSRADS TTIGKFIGND YNYETASTGL VSDADTVLKA KGAATRKFYR YPSENPVKEA IGQQVRHQNE AAEVRAGLFA GGGNTPSMLA PGNAVTITGD PFGIGDYVIA AAALSVTDHA GIGGGTATVD VAFTLFDASV PWRPELLPKP QIAGLQSALV VGPSGDEIYT NKYGRVKVQF NWDTRGKKDE NSSCWVRVIQ PWAGAGWGFQ FLPRIGQEVA ISFLESDIDR PVVIGSFYNS GQVSLFNLPA EQNKAGFRSR STKSGGTSNY SEFSIDDTKG SEVVLLHAER DYTVEVEHDE TRTIGNNRTV TVKKDEAITV DGNQTETVKG NRTFEVKQDH SETVDGNQSV TVKGKQSVSV QGQQSVSVTG AVTYESMESI TLKVGGNSIK IDMTGITLSG TLIKINAQAE LSTSGAIAQH SGSGMLKLQG GIIMVN
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