| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2018 |
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| Symbol | |
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| ID | 5161288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2214671 |
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| End bp | 2216008 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640553941 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001235137 |
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| Protein GI | 148261010 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACG CCCTGCCCGT GTTCGGCCGA CGTGCCGTCG AACCTTCCGC CCCGGTCCAG
CAGACGATCC GGTTACGGCT GGAAGACGTC GAGATGATCC GCGCGCTCTG CCTGTCGAAT
ATCGACGCTT CGTCGATCGC CGGGTTGACC CATGCGCGGC TGTTGCAACG CGTCGAGGGC
ATGGTCGCTG AACTCGCCAC CGAGCACAGG ATCCAGCTGA ACCGGAACGA GCAGAACCAG
ATTGCCGCCG AGCTTGTGGA CGACATGCTT GGCCTGGGAC CGCTCGAGCC GCTGCTGGAG
GACGAAACGA TCACCGACAT CATGGTGAAC GGTCCGGAAC GGGTTTTCGT GGAGCGGCGC
GGCCGGCTTG AGCAGCTTGC GGTGCGCTTC CGTGACTCCG CCCATCTCGC GAACATCTGC
CAGCGGATCG CCGCCTCTGT CGGCCGGCGC GTCGACGAAT CGAGCCCGAT GGTGGATGCC
CGGCTCAAGG ACGGCTCGCG CGTGAATATC GTGCTGCCTC CGCTTTCGAT CGACGGCCCC
TGCCTGTCGA TCCGCAAATT CGCCAAAAAG CCGATCAATT TCGGCAAGCT GATCGAGTAT
GGCTCGCTCA CGCCGCCCGT TGCCCGGCTG CTGGAAATTG CATCCCGTTG CCGGCTCAAC
GTCATCATTT CCGGGGGCAC CGGCTCGGGC AAGACCACGA TGATGAACGC GATGAGCAGC
TTCATCGATC CGACCGAGCG GGTTGTCACC GTCGAGGATG CCGCGGAACT GCAACTCCAG
CAGCCGCACG TGGTCCGGCT TGAGACCCGC CCGATGAATC TCGAGGGCAA GGGAGAGATT
ACCCAGCGCG ATCTCGTTCG CAACGCGCTG CGCATGCGGC CCGACCGGAT CATCATCGGG
GAGGTGCGTG GCCCCGAGGC ATTCGACATG CTGCAGGCGA TGAACACCGG CCATGACGGA
TCGATGTCGA CGATCCACGC CAACAACACG CGGGATGCGC TGGCCCGCAT CGAAAACATG
GTGCAGATGG CCAGCATGGG TCTTTCGCCG CGTGCGATCC GGATGCAGGT CGTCTCGGCC
GTCAACCTGA TCGTCCAGGT CGAGCGCCAG CGCGACGGCG GCCGGCGCCT CGTGCAACTC
ACCGAGATCG CCGGAATCGA AGGGGAAACG CCTCTTCTCA ACGACATCTT CAAGTTCGAA
GTGCTGGGCG AAGATGCGAC GGGCCGGATC ATCGGTCGCT ATGCGATTTC CCATACGCGG
GCGAGCTTCC ACGAACGACT CAATTATTTC GGCCTGCTTC GTGCCTGGAA GGCCGCACTG
GAAGAGGCAG CGGCATGA
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| Protein sequence | MMDALPVFGR RAVEPSAPVQ QTIRLRLEDV EMIRALCLSN IDASSIAGLT HARLLQRVEG
MVAELATEHR IQLNRNEQNQ IAAELVDDML GLGPLEPLLE DETITDIMVN GPERVFVERR
GRLEQLAVRF RDSAHLANIC QRIAASVGRR VDESSPMVDA RLKDGSRVNI VLPPLSIDGP
CLSIRKFAKK PINFGKLIEY GSLTPPVARL LEIASRCRLN VIISGGTGSG KTTMMNAMSS
FIDPTERVVT VEDAAELQLQ QPHVVRLETR PMNLEGKGEI TQRDLVRNAL RMRPDRIIIG
EVRGPEAFDM LQAMNTGHDG SMSTIHANNT RDALARIENM VQMASMGLSP RAIRMQVVSA
VNLIVQVERQ RDGGRRLVQL TEIAGIEGET PLLNDIFKFE VLGEDATGRI IGRYAISHTR
ASFHERLNYF GLLRAWKAAL EEAAA
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