Gene Acry_1980 details

Gene Information

• Locus tag: Acry_1980
• ID: 5161163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2170924
• End bp: 2172735
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640553901
• Product: sodium/hydrogen exchanger
• Protein accession: YP_001235100
• Protein GI: 148260973
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0475] Kef-type K+ transport systems, membrane components
• TIGRFAM ID: [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.846503
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCATCA CCCTCGTCGC ACTGCTCGCG GCCACGGTCG TCACGGTGCC GCTGGCGCGT 
CGCCTCGGGG TCGGCAGCAT CGTGGGCTAT CTGTTCGCCG GGCTCATCAT CGGTCCGGCC 
GGCCTGCGCC TCGTCACCGG CATCTCCGAA ATCCGCAGCG TGTCGGAGCT CGGGGTGACC 
ATGCTGCTGT TCCTGATCGG GCTGGAGATT CGCCCGCACC GGCTCTGGAT CCTGCGCAAG 
ACCATCCTGG GCCTCGGTTT CGGTCACATG ATCCCGAGCG CCGCCATTCT GGCCGTCCTT 
GCCCATTTCG CCGGACTCGG CTGGCCGGCG GCGACGGTGG TCGGCCTCGG CCTGTCGCTC 
TCCTCCACGG CCATCGTCCT GCCGATGCTG AACGAGCGCA ACCTGCTCAG CGCCGCCTCC 
GGCCGCGATG CCTTCGCCGT CCTGCTGTTC CAGGATATGG CCTTCATCCC CCTGGTCGCC 
CTGGTGCCGC TGCTCGTCGG CAATACGCTG GCGAGCCATC TCGCCGCCGG CGCGGCCCCG 
GCGGATGTCG CCGCGCATTT CGCCCACAAT GTCCCCTGGC TCGCGGTCGG GCGGGCGGTG 
CTGGCGGTGG CGGCGATCCT GTTCGGCGGC ATGGTCCTCG CCGACCGCGT CTTCCGCCTG 
ATCGGCGGTG CGCGCACCCC CGAGGTGTTC ACCGCGATGA CGCTGCTGAT CGTCGTCGGC 
ACGGCGGCTC TGGCCCACTG GGCCGGACTG TCGGCCTCGC TCGGCGCCTT CATGGCGGGC 
GCGCTGCTGT CGGATTCGGA GTTCCGTCAC GCCATCCAGG CCGATATCGA GCCGTTCGAG 
GGCCTGCTGC TCGGCTTCTT CTTCATCTCG GTTGGCATGT CGGTCGATTT CTCGCTGTTT 
CATAGCGAAC CGCTGCTGAT CGTCGCTTCC GTGGCCGCGC TGCTTGTCGT GAAGACCGCG 
GTCGGGTTCG TGGTCGCCTT CGCGAAGCGC CGCAACGTGG CCACCGCGCT GCGCTTTGCC 
GCTGCATTGC CGGAAGGCAG CGAGTTCAGC TTTGTGGTCT TCGCCGCCGC CGTCGGTGCC 
GGGGTGCTGA ACCGGGCCCA GTCTGGGCTG GCGACGCTCA CTGTCGCCCT GTCGATGTTG 
GTGGTGCCGC TCGGTTTCGC CGGCATCGAG CGCTGGGTCA TGCCGCGCAT CGCCCGCCGC 
CAGACGCCAC CGACCACCCC GATCGAGGAG GGCGCCGTCG TCCCGGTGCT GATCTGCGGC 
TTCGGCCGGG TCGGCCAGAT CGTCGGCCGG CTGCTCTCGG TGCGACGGAT TCCCTTCGTC 
GCCCTCGACC AGAACGCGGA ACATGTCGCC TTCGTCCGCC GCTTCGGCGC GCGGGCCTAT 
TTCGGCGATC CGGCCCGGCT CACCGTCCTG CGCGCCGCCG GCGCGGGCAA TGCGAAGCTG 
CTGGTCATCG CACTCGACGA TCCCGATGCG GCGCTCCGGG TGGCCGACCT CGCGCGCCGC 
CACCTGCCGC ACCTGACCAT CCTGGCGCGG GCGCGGAACC GCCGCCATGC CCAGTTGCTG 
ATGGATCGCG GCGTCGAGCA CATCGTGCGC GAAACCTTTG CATCGAGCCT CGAACTCGGC 
GAACGCGCGC TGCGCGAACT CGGCATTCCG GCCGAGGAGG CGGCGCGCAC CATCTTCACG 
TTCCGGCAGC GGGACGAGGC GCTGCTCACC GAAACCCTCG GCTTTGCCGG CGACCCGTCG 
CGCGTGGTCG CCAGCATCGA GCAGAGCGTC GCCGAACTGC AGTCCCTCTT CGAGGCCGAT 
CGCGGCGGCT GA 

 

Protein sequence

MIITLVALLA ATVVTVPLAR RLGVGSIVGY LFAGLIIGPA GLRLVTGISE IRSVSELGVT 
MLLFLIGLEI RPHRLWILRK TILGLGFGHM IPSAAILAVL AHFAGLGWPA ATVVGLGLSL 
SSTAIVLPML NERNLLSAAS GRDAFAVLLF QDMAFIPLVA LVPLLVGNTL ASHLAAGAAP 
ADVAAHFAHN VPWLAVGRAV LAVAAILFGG MVLADRVFRL IGGARTPEVF TAMTLLIVVG 
TAALAHWAGL SASLGAFMAG ALLSDSEFRH AIQADIEPFE GLLLGFFFIS VGMSVDFSLF 
HSEPLLIVAS VAALLVVKTA VGFVVAFAKR RNVATALRFA AALPEGSEFS FVVFAAAVGA 
GVLNRAQSGL ATLTVALSML VVPLGFAGIE RWVMPRIARR QTPPTTPIEE GAVVPVLICG 
FGRVGQIVGR LLSVRRIPFV ALDQNAEHVA FVRRFGARAY FGDPARLTVL RAAGAGNAKL 
LVIALDDPDA ALRVADLARR HLPHLTILAR ARNRRHAQLL MDRGVEHIVR ETFASSLELG 
ERALRELGIP AEEAARTIFT FRQRDEALLT ETLGFAGDPS RVVASIEQSV AELQSLFEAD 
RGG