Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1896 |
Symbol | |
ID | 5160525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2091722 |
End bp | 2093497 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640553817 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001235016 |
Protein GI | 148260889 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000746321 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTGC TGGACCATCT GGCGGCGCTT TCGCCGCCCA GGGCCCTCCG CCGGGCGCGG CGCCTCGCCG CCGCCGGCGC GCGGGCGCGG GCGGCGCGGC TCTACAGCGT CGCCGCCGCC GCCGGACTCG TCGAGGCGCA GAACGAGGTG GCGCACGCCT ATCTCGCCGG CACCCTGTTC CCGCGCAACC CGGCCGAGGC CGCGCGCTGG TTCCGCGCCG CGGCCGAGGC CGGCCACGTG CCGAGCCAGT GCCGCCTCGC CAGCCTGCAC CTGCAGGGGC TGCGCGCCGC CGCGTCCGGC CCCGGCCTGT TCCCGGACGA TCACTGGGCC GCCGATGACG CCCCCGGCGC CGACTATCCG GCGGCCCTGG CCTGGGCCCG CAAGGCGGCG GACTCCGGCT CGGCGGACGG CCAGTCCCTG CTCGGCTTCA TCCTCGCCAA CGGCCCCGAG GGCATTCTCG ACCGCGACGC CGCGCTCGAC TGGTACCGCA AATCCGCCGC GCAGGACTGG CCGCAGGGCC ATCTCGGCCT CGGCATGCTG CTGATGTCCC GCGCCGACAC GGCGGAAAAG ACGATCGAGG CGATGGCCCC GATCGAGCGC GCCGCCGAGG CCGGCCTGCC CACCGCGCAT TTCCTGCTCG GCGTCATCCA CGAGCAGGCG GTCGGCGTCC TGCCCGATCC GTCGCGCGCC CTGATGCACT ACCGCAAGGC GGCGATCCAC GGCATCCGCA ACGCCCAGGC GAAGCTCGGC GCCATGCTGC TCGCCGGCAG CGGCTGCGCG CCGGACCCGG TCGAGGGCGA ATCCTGGCTC CGCCGCGCCG CCGTCGCCGG CGATCCCGAG GCCGCCGCCC TGGTCGGCGA TCTCTACGCC CGCGGCGGCG ACCTGCCGCC GAACTATGCC GAGGCGGCGA TCTGGTTCCG CGCCGCGGCC GAGGCCGGCC ACCGCACCGC CGCCCGCGCC CTCGGCATGC TCTACCTCAC CGGCGCCGGC GTCGTGCGCG ATGCCGACGA GGCGGCGCGC TGGCTCGCCC GCGCCGCCAG CGGGGGCGAT GCCGCCGCCC AGGCCAACCT CGCCAACCTC ATCCTCCACC GCCAGGTCCG CAGCGCCTCG GTCGATGGCC TGCCGATCCA CGAATGGTTC GAGCGCGCGG CGGGCTCCGG CGACGCGATC GGCGCCTTCA ACTACGCCGT CTGCCTCACC GAGGGCATCG GCGTCGCGCG CGACGAGGCG AAGGGGGCGA TGTGGCTGCG CCGCGCCGCC GAAAACATCG TCAACGCGCA GTACTGGTAT GGCCGCATGC TGCTGGAGGG CAGGGGCGTT CCCGCCGATC CCGAGGCCGC CTATGGCTGG ATCAGCCGCG CCGCCGACAC CGGCATGACC GACGCCCTGG CGCTCCAGGC CGAGATGAAG CTGCATGGCC GCGGCACCGC GCGCGACCAT GCGGGCGCGC GCGATCTCTT CCTCCGCGTC GCCGAAACCG GCCATCCCGG CGCCATGTTT GCCCTCGGCG CCCTGCATGG CGGCGGGCAC GACATTCCGG TCGACCGCGC GGCGGCGCTG CACTGGTATC GCCGCGCCGC CGAGGCGAAC CACCCGCTCG CCCAGCTCAT GCTCGGCCGC TGGCTGCGCA AGGGGCTGGC CGGCCCGCCG GAGCCGGCGG AGGCCGAAAC CTGGCTCCGC CGCGCCCTCG CCCAGGGCGT CGAGGAGGCG CGGTCCGACC TTGTCGACCT TGCCGCCGGG CCGGAACCCG CCGCCAGCCG TGCCGCCGGG GACTGA
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Protein sequence | MRLLDHLAAL SPPRALRRAR RLAAAGARAR AARLYSVAAA AGLVEAQNEV AHAYLAGTLF PRNPAEAARW FRAAAEAGHV PSQCRLASLH LQGLRAAASG PGLFPDDHWA ADDAPGADYP AALAWARKAA DSGSADGQSL LGFILANGPE GILDRDAALD WYRKSAAQDW PQGHLGLGML LMSRADTAEK TIEAMAPIER AAEAGLPTAH FLLGVIHEQA VGVLPDPSRA LMHYRKAAIH GIRNAQAKLG AMLLAGSGCA PDPVEGESWL RRAAVAGDPE AAALVGDLYA RGGDLPPNYA EAAIWFRAAA EAGHRTAARA LGMLYLTGAG VVRDADEAAR WLARAASGGD AAAQANLANL ILHRQVRSAS VDGLPIHEWF ERAAGSGDAI GAFNYAVCLT EGIGVARDEA KGAMWLRRAA ENIVNAQYWY GRMLLEGRGV PADPEAAYGW ISRAADTGMT DALALQAEMK LHGRGTARDH AGARDLFLRV AETGHPGAMF ALGALHGGGH DIPVDRAAAL HWYRRAAEAN HPLAQLMLGR WLRKGLAGPP EPAEAETWLR RALAQGVEEA RSDLVDLAAG PEPAASRAAG D
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