| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1880 |
|---|
| Symbol | |
|---|
| ID | 5160349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 2071606 |
|---|
| End bp | 2071983 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640553802 |
|---|
| Product | succinate dehydrogenase, cytochrome b subunit |
|---|
| Protein accession | YP_001235001 |
|---|
| Protein GI | 148260874 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
|---|
| TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.519683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCA TGCGTTCGGC ACTCGGCCGC GCCCGCGGCA TGGGGGCCGC GAAATCGGGC
GTGCATCACT GGTGGGCGCA GCGGCTGACC GCGCTGGCGC TGCTGCCGCT CGCGCTCTAC
GCCGTGCTGT CGGTGCTGCT GCTGGAGGGC GCGAGCCAGG CCGAGATGCT GCGCTACATG
GCCGAGCCGT GGAACGGGGT GCTGTTCCTC GCCCTCGTGA TCGCGCTGTT CTATCACCTG
CAGCTGGGTT TGCAGGTGGT GATCGAGGAC TACATCCGCT CCGAGGGCAA GCGGCTCGCG
GTCATGCTCG CGATGCGGGC GACGGCCGGG TTCTTCGGGC TGCTGGCCAT CATCTCGGTC
CTGAAACTGT CCTTCTGA
|
|---|
| Protein sequence | MRIMRSALGR ARGMGAAKSG VHHWWAQRLT ALALLPLALY AVLSVLLLEG ASQAEMLRYM
AEPWNGVLFL ALVIALFYHL QLGLQVVIED YIRSEGKRLA VMLAMRATAG FFGLLAIISV
LKLSF
|
|---|
| |