Gene Acry_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1872 
Symbol 
ID5160248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp2064736 
End bp2065431 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content74% 
IMG OID640553794 
Producthypothetical protein 
Protein accessionYP_001234993 
Protein GI148260866 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00204012 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTTC CCCATCCTGA ATTTCACCTT CTCGGCCGCA CCGGCTGGCT CCGCGCCGCC 
GTGCTCGGCG CCAATGACGG CATCATCTCC ACCGCCAGCC TCATCCTCGG CGTGATCTCC 
GCGAGCGGCG TCCGGCACGA TGCGCTGGTC GCCGGCGTCG CCGGCCTCGT CGCCGGAGCG 
ATGGCGATGG CCGCCGGCGA ATACGTCTCG GTCAGCTCCC AGGCCGATAC CGAAACCGCC 
GCCCTGGCCA AGGAACGCGC CGAACTCGCC GAAAGCCCGG CCTCCGAGCA CGCCGAACTC 
GCCGCGATCT ACGTCGCCCG TGGCCTCGAC CCCGCTCTCG CCGGCGCCGT CGCCACCCAG 
CTCATGGCGC ATGACGCGCT CGGCGCCCAT GCCCGCGACG AGCTCGGCCT CACCGAATTC 
ACCGCCGCCA ACCCGATCCA GGCCGCCATG GCCTCCGCCG CCACCTTCGC CGTCGGCGCC 
GCCGCCCCGC TCATCCTCGC CGCCACCCTG CCGAAGCCCG TGCTCTCCGC CGGAATCGGC 
CTCGGCGCCC TCGTCTTCCT CGCCGTGCTC GGCGCCGTCG GCGGCCGCGC CGGCGGCGCG 
CCGATGCTCA AACCCGCCCT GCGCGTCGCC TTCTGGGGGG CGCTCGCCAT GGCCGCCACC 
ACGCTGATCG GCCACCTGTT CGGCGCCACC GTCTAG
 
Protein sequence
MHLPHPEFHL LGRTGWLRAA VLGANDGIIS TASLILGVIS ASGVRHDALV AGVAGLVAGA 
MAMAAGEYVS VSSQADTETA ALAKERAELA ESPASEHAEL AAIYVARGLD PALAGAVATQ 
LMAHDALGAH ARDELGLTEF TAANPIQAAM ASAATFAVGA AAPLILAATL PKPVLSAGIG 
LGALVFLAVL GAVGGRAGGA PMLKPALRVA FWGALAMAAT TLIGHLFGAT V