Gene Acry_1848 details

Gene Information

• Locus tag: Acry_1848
• ID: 5160007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2038348
• End bp: 2038863
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640553770
• Product: protocatechuate 3,4-dioxygenase, alpha subunit
• Protein accession: YP_001234969
• Protein GI: 148260842
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3485] Protocatechuate 3,4-dioxygenase beta subunit
• TIGRFAM ID: [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGCGC AGCAGACGAT CGGGCCGTTC TGGCACCTGA TCGACCAGCC GGACTGGTGG 
GACCTGACGC GGTTCGGCGC CGCCGGCGCG CGGATCGCGA TCGAGGGAAG GATCACCGAT 
GGCGCGGGGG CGGCGGTGGC CGACGCGGCG GTGGAGCTGT TCCAGGCCTC GCCCGCGCGG 
GATGCGGTAT TTCCCGGCTA TGGCCGGGTG GCGGCGGATG CGGAGGGCCG GTTCCGCTTC 
GCCACCGTGA TGCCGGGCCC GCTGCCCGGG CCGCGCGGGG CGAACGCGCA GCAGGCGCCG 
CATTGCGGCC TGGCGCTGCA TGCGCGCGGC CTGCTGCGGC CGCTTTTCAC GCGGATCTAT 
TTCGCCGGGG ATGCGCTGAA CGCGACCGAC CCGCTGCTGA GCCTGGTGCC GGCGGCGCGG 
CGCGACACGC TGGTGGCGGA TGAGACCTCG CCCGGCGTCT GGCGGCGCGA CATCGTGCTG 
CAGGGCGAGG GCGAAACGGT ATTTCTGGAC TTTTGA 

 

Protein sequence

MSAQQTIGPF WHLIDQPDWW DLTRFGAAGA RIAIEGRITD GAGAAVADAA VELFQASPAR 
DAVFPGYGRV AADAEGRFRF ATVMPGPLPG PRGANAQQAP HCGLALHARG LLRPLFTRIY 
FAGDALNATD PLLSLVPAAR RDTLVADETS PGVWRRDIVL QGEGETVFLD F