Gene Acry_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1669 
Symbol 
ID5161911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp1844106 
End bp1844762 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID640553584 
Product3'-5' exonuclease 
Protein accessionYP_001234793 
Protein GI148260666 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.335885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA CCCAGTTTGC CGCCGGCGCC ACCATCCACA TCCATCGCCA CGACCTTCCG 
GACGGGCTCG ATCTCGGCCC CGTGGTCGCC GTCGACACCG AAACGATGGG CCTCGATCCG 
CGGCGCGACC GGCTCTGCCT CGTGCAGCTC TCCGCCGGCG ACAACAGCGC GCATCTCGTG 
CAGATCGTCC CGCCCGCCCT GGGCGGGCGC GGCGCCGACT GCCCGAACCT GAAGCGCCTG 
CTCGAGCATC CCGGCGTGAC CAAGCTGTTC CACTTCGCCC GGTTCGACCT CGCGATGCTG 
CATCACGCGC TCGGCGTGAC GACCGCGCCG GTGATCTGCA CCAAGATCGC CTCGAAGCTG 
GTCCGCACCT ATACCGACCG CCACGGGCTG AAGGATCTCT GCCGCGACCT CGTCGGCATC 
GAGATCTCCA AGCAGCAGCA GACCAGCGAC TGGGGTTCGG CCGAGCTCTC GCCCGAGCAA 
TGCGCCTATG CGGCGTCGGA CGTGCTGCAC CTGCATGCGA TCTGGGCGCG GCTCGAAGCC 
CTCCTGGTCC GCGAGGGGCG GCGCGAACTG GCCGATGCGT GCTACCGGTT CCTGCCGGCG 
CGCGCGAAGC TCGATCTGCT CGGTTTCGAG GACCCCGACA TTTTCAGCCA TCGCTGA
 
Protein sequence
MSQTQFAAGA TIHIHRHDLP DGLDLGPVVA VDTETMGLDP RRDRLCLVQL SAGDNSAHLV 
QIVPPALGGR GADCPNLKRL LEHPGVTKLF HFARFDLAML HHALGVTTAP VICTKIASKL 
VRTYTDRHGL KDLCRDLVGI EISKQQQTSD WGSAELSPEQ CAYAASDVLH LHAIWARLEA 
LLVREGRREL ADACYRFLPA RAKLDLLGFE DPDIFSHR