Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1658 |
Symbol | |
ID | 5161428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 1828564 |
End bp | 1829913 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640553572 |
Product | extracellular solute-binding protein |
Protein accession | YP_001234782 |
Protein GI | 148260655 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.521221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGAGAG TGCTGAAATA CGCGCTGGCA GGGGCGACGA GCGCGCTCGT CGGCCTCGGC GCGAGCGCCC CGACCGCCCA TGCCTGGACG CTCGCCCAGG CCGCCGCGCC CTACAAGGGC ATGACGGTGA CCGTGGTCGG GCTCGACCGG CCGAGCTACA AGGCCGCCGA GAAACTGACG CCGGAATTCG AGAAGGAAAC CGGCATCCAC GTGAAATGGG TGAACTACCC GTACGAGAAC ACGCTGAAGG CCGAGACGCT GAACTTCGTC TCGCACAGCA GGCAGTTCGA CGCGATCCTG ACCGACGTCG TCTGGCCGGT GGACTTCACC CGCGCCCACT GGGTCGTCCC GGTCGATCAT TTCCTGGCCG ACAAGGCGAT CGCCGATCCC GATATCGACA TCGGCGATTT CTTTCCGGTC TGGCGCCATG CCTTCACGGT GGGCGGCAAG CTCATCGGCC TGCCGTTCGA TTCCTATGCC GGGCTGCTCT ACTACAACAA GAAGATCCTC AAGGAGCACG GCTTCTCCGG CCCGCCGACC ACCTGGACCC AGCTGCTGAA CGACTACGCG GCGAAGCTCT ACGATCCCTC GAAGAACCTC TACGGCTACG CGCTGCAGTC GGCCCGCGGC GAGACGCAGA CGGCCGACAG CTTCACCCGC TTCCTCTGGC CCTGGGGCGG GCGTTACTTC GACGCCAAGG CGAAGAAGAT GACGCTGGAT TCGAAGGCGG CGATCGCCGG CGAGACCTTC CGCCAGGAGC TGGTGAAATA CATGCCGAAG GGCATCATCG CGGATGATCA CTCGCAGGTC GTCCAGCTGA TGGGCCAGGG GCAGCTGGCG ATGATCACCG AATGGTCGGC CTTCTACCCG ACGCTCAAGG CCTCCTCGAT CGGCAACGAT CTCGGCGTCA CGGTCGAGCC CAAGGGGCCC AATGGCCGCT ACTCGGCCTT CGGCGGCTTC GCCTACATGG TCAGCGCGCA GGTTCCGGCG AAGGAGCAGA ACGCGACCTG GCTGTTCATC CAGTGGCTGA CCTCCAAGGC GATGGCGCAG CCGCTGATCG AGAACGGCGC GGTGGTCGCC CGCAAGAGCG CCGATACCGA CCCGGCGCTC GATGCGAAAT ATCCCTACCT GAAGCCGATG GTGGAAACCT GGGAAAACGG CAGCGTGCCC GACTGGCGCC CGCAGATCGC CTGCTATCCG TATTTCTCTG AACTGGTCTC CGATTACGGC TCCGAAATCG AGGCCGGCAA ATACCCGGTC GCGAAGGGGC TGAAGCTGCT CAACGCCAAG CTCCAGCACT ACATGAACTC GACGGGTTGC TGGAATTCGG TCAACCTGCC GAAGCGCTGA
|
Protein sequence | MQRVLKYALA GATSALVGLG ASAPTAHAWT LAQAAAPYKG MTVTVVGLDR PSYKAAEKLT PEFEKETGIH VKWVNYPYEN TLKAETLNFV SHSRQFDAIL TDVVWPVDFT RAHWVVPVDH FLADKAIADP DIDIGDFFPV WRHAFTVGGK LIGLPFDSYA GLLYYNKKIL KEHGFSGPPT TWTQLLNDYA AKLYDPSKNL YGYALQSARG ETQTADSFTR FLWPWGGRYF DAKAKKMTLD SKAAIAGETF RQELVKYMPK GIIADDHSQV VQLMGQGQLA MITEWSAFYP TLKASSIGND LGVTVEPKGP NGRYSAFGGF AYMVSAQVPA KEQNATWLFI QWLTSKAMAQ PLIENGAVVA RKSADTDPAL DAKYPYLKPM VETWENGSVP DWRPQIACYP YFSELVSDYG SEIEAGKYPV AKGLKLLNAK LQHYMNSTGC WNSVNLPKR
|
| |