Gene Acry_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1595 
Symbol 
ID5161867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp1762124 
End bp1763230 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content70% 
IMG OID640553510 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_001234720 
Protein GI148260593 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.32236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGA AAACCACCTT GCTGGCGGCG CTTTCCGTCG CCGGCTTCGC GACACCGGCG 
CTGGCCGCGC CCTCGATGCT CGCGACCGCG CGGCAATATG TCGCCGCCGC GACCAATCCC 
GCCCTGCCCT ATACCGGGCC GGCCACCGGG CCGAAGGCGG TGGAAGGCAA GTTCATCGTC 
TATGTCTCGT CGAACCAGTC GAATGGCGGG GCGCGCGGCG TGGGCGAGGC GGTGCGCGCG 
GCGGCGAAGG CGATCGGCTG GCGCTTCCGC CTGCTCGACG GCAAGGGCAC GGCGGCCGGG 
CAGAACGCCG CCCTGTCCGA GGCGATCGCG CTGAAGCCCG CCGGCATCGT CCTTGGCGGG 
CTGGATGCGA CGCAGTCCGC CCCCTTCATC GAACAGGCCG ACAAGGCCGG GATCAAGGTG 
GTCGGCTGGA ATGTCAGCCC GCACCCGGGG CCGATCGCCA AGCCCGCCAT CGTCTACAAC 
GTGGCGCAGG ACCCGCTGGA GGTCGCCCGC GCCGCCGCCC TCTACGCCAT CGCCCGCTCG 
GACGGGCATG CCGGCGTCGT CATCTTCACC ACCAGCGAAT TCTCGATCGC GCTCGCCAAG 
TCGAACCGGA TGGCGGCGAT CATCCGCGCG TGCAAGGGCT GCCACCTGCT CGGCATCGAG 
AACGTGCCGC TCTCCTCCAC CGCGACGCGC ATGCCCCAGG TCACCGCCGC CCTGCTCGCC 
AAATACGGCA AGAGCTGGAC CTATTCGCTC GCCATCAACG ACCTCTATTA CGACTACATG 
GCCCCCGGCC TGTCCGCCGC CGGCCATCGC GGCGACGGCC CGCCCTACAA CGTCTCGGCC 
GGCGACGGCT CGCAATCCGC CTTCCAGCGC ATCCGCTCGA AACAGTTCCA GACCGCGACC 
GTCGCCGCCC CGCTGGAGCT CGAGGGCTGG CAATGCGTCG ACGAGCTGAA CCGCGCCTTC 
GCCGGGCAGA AGCCGGTCGC CGAGCCCGAC CCGGTGCACC TCTTCACCCC CGAGAACGTC 
AACCAGGACG GCGGTGCGAA GGACGTGTTC AACCCGCCCA ACGGCTACAA GAAGGTGTTC 
CTGCGGATCT GGGGCCGCGC CGGCTGA
 
Protein sequence
MKRKTTLLAA LSVAGFATPA LAAPSMLATA RQYVAAATNP ALPYTGPATG PKAVEGKFIV 
YVSSNQSNGG ARGVGEAVRA AAKAIGWRFR LLDGKGTAAG QNAALSEAIA LKPAGIVLGG 
LDATQSAPFI EQADKAGIKV VGWNVSPHPG PIAKPAIVYN VAQDPLEVAR AAALYAIARS 
DGHAGVVIFT TSEFSIALAK SNRMAAIIRA CKGCHLLGIE NVPLSSTATR MPQVTAALLA 
KYGKSWTYSL AINDLYYDYM APGLSAAGHR GDGPPYNVSA GDGSQSAFQR IRSKQFQTAT 
VAAPLELEGW QCVDELNRAF AGQKPVAEPD PVHLFTPENV NQDGGAKDVF NPPNGYKKVF 
LRIWGRAG