| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1335 |
|---|
| Symbol | |
|---|
| ID | 5162301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1491583 |
|---|
| End bp | 1492395 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640553251 |
|---|
| Product | putative hemolysin-like protein |
|---|
| Protein accession | YP_001234465 |
|---|
| Protein GI | 148260338 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3176] Putative hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG AACGCCCGAT GGACAGCCTG CTGGCCTTTC CGGAAATCCG GGTCGGCAAT
CTCGGCGTCC GCCTCGCCGC GACCGCGGCC GAGCTCGACG CCGCCCAGGC CCTTCGCTTC
CGCATCTTCT ACGACGAGCT CGGCGCCCAT CCCGACGCCG CGACCCTCGC CTCCGGCCGC
GACCAGGACG CCTTCGATGC GATCGCCGAT CATCTCCTCG TGATCGATCA CGACATCGCC
GACGATGCCC GCGGCGTCGT CGGCACCTAC CGGCTGATCC GGCAGGACGC CCTGCCCCAA
GGCAGCCATT TCTATTCGGC CGACGAATAC GACATCGCGC CGCTCGAACG CTTCTCCAGC
CGCCTGCTCG AGCTCGGCCG CTCCTGCGTC GACCAGGCGC ACCGCTCCCG CGCCGTCATG
CAGCTGCTCT GGCGCGGCAT CGCCGCCTAT GTGTTCCAGC ACGGGATCGA GCTGATGTTC
GGCTGCGCCA GCCTGCACGG CACCGATCTC GACGATCTGG CGCCGGCGCT CTCCTACCTG
CACGCCCACC ACCTCGCCCC GGCGCACATC CGCCCGCGCG CGCTGGAGGC GCGCTATGTC
GAGATGTGCC GCCTCGGCGC CGACGAATAC GACGCCCGCC AGGTCCTCGC CGAGCTGCCG
CCGCTGATCA AGGGCTATCT CCGCCTCGGC GGCTTCGTCG GCGACGGCGC GGTGATCGAC
TGGCAGTTCA ACACGACGGA CATAGCCGTC GTCGTGCAGA CGGATCTTGT GACCGAAAAA
TATTACCGCC ATTACGAGCG ACAGTCCCGC TGA
|
|---|
| Protein sequence | MTAERPMDSL LAFPEIRVGN LGVRLAATAA ELDAAQALRF RIFYDELGAH PDAATLASGR
DQDAFDAIAD HLLVIDHDIA DDARGVVGTY RLIRQDALPQ GSHFYSADEY DIAPLERFSS
RLLELGRSCV DQAHRSRAVM QLLWRGIAAY VFQHGIELMF GCASLHGTDL DDLAPALSYL
HAHHLAPAHI RPRALEARYV EMCRLGADEY DARQVLAELP PLIKGYLRLG GFVGDGAVID
WQFNTTDIAV VVQTDLVTEK YYRHYERQSR
|
|---|
| |